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L2_022_000M1_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_318_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(184..1731)
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Ribonuclease Y n=3 Tax=Alistipes RepID=I3YMU6_ALIFI
hypothetical protein
L2_022_000M1_scaffold_318_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2034..2357)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MVZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65580.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Cell division protein ZapA
L2_022_000M1_scaffold_318_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2350..2715)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002882941
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD25363.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000M1_scaffold_318_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2785..4080)
DNA (1296bp) protein (432aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=root RepID=B0MVY7_9BACT
L2_022_000M1_scaffold_318_5
unknown

Not on your lists

comp(4077..4817)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037218AA
L2_022_000M1_scaffold_318_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4845..5846)
DNA (1002bp) protein (334aa)
cell division protein FtsY n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030D8A54
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_022_000M1_scaffold_318_7
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6341..7246
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VPW6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC96309.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L2_022_000M1_scaffold_318_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7548..7706)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNR1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78327.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_318_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7721..7903)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=2 Tax=Alistipes RepID=D4IND3_9BACT
LSU ribosomal protein L33P
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_022_000M1_scaffold_318_10
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7918..8151)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Alistipes sp. CAG:53 RepID=R5WX06_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
LSU ribosomal protein L28P
L2_022_000M1_scaffold_318_11
unknown

Not on your lists

comp(8337..9389)
DNA (1053bp) protein (351aa)

This feature has no annotations

L2_022_000M1_scaffold_318_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9432..9965)
DNA (534bp) protein (178aa)
Competence/damage-inducible protein CinA-like protein n=2 Tax=Alistipes RepID=I3YMW3_ALIFI
competence/damage-inducible protein CinA-like protein
Competence/damage-inducible protein CinA-like protein {ECO:0000313|EMBL:AFL78331.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_318_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9973..11214)
DNA (1242bp) protein (414aa)
competence damage-inducible protein A n=1 Tax=Alistipes senegalensis RepID=UPI0002E1EB65
competence/damage-inducible protein CinA C-terminal domain
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L2_022_000M1_scaffold_318_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11288..12562)
DNA (1275bp) protein (425aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UB45_9BACT
L2_022_000M1_scaffold_318_15
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12559..13554)
DNA (996bp) protein (332aa)
phosphoglycerate dehydrogenase-like oxidoreductase (EC:1.1.1.290)
4-phosphoerythronate dehydrogenase n=1 Tax=Alistipes sp. CAG:268 RepID=R6WQ80_9BACT
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDC96317.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L2_022_000M1_scaffold_318_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13937..14977
DNA (1041bp) protein (347aa)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family (EC:3.5.3.11)
Arginase family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVX4_9BACT
Arginase family protein {ECO:0000313|EMBL:EDS03445.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L2_022_000M1_scaffold_318_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14989..16380
DNA (1392bp) protein (464aa)
sodium:proton antiporter n=1 Tax=Alistipes sp. JC136 RepID=UPI000289C3B0
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
sodium/proton antiporter, NhaA family
L2_022_000M1_scaffold_318_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16377..17063
DNA (687bp) protein (229aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=root RepID=B0MVX2_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
L2_022_000M1_scaffold_318_19
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17156..18262
DNA (1107bp) protein (369aa)
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=root RepID=R6VDT3_9BACT
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L2_022_000M1_scaffold_318_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18443..18814)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=root RepID=B0MVX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65218.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_022_000M1_scaffold_318_21
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19399..19665)
DNA (267bp) protein (89aa)
50S ribosomal protein L31 n=1 Tax=Alistipes senegalensis RepID=UPI000315A5A2
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L2_022_000M1_scaffold_318_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20394..21128)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E3DE3B
acetyltransferase, ribosomal protein N-acetylase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR58770.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_022_000M1_scaffold_318_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21872..23059
DNA (1188bp) protein (396aa)
Elongation factor Tu n=3 Tax=root RepID=B0MVW2_9BACT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
translation elongation factor TU
L2_022_000M1_scaffold_318_24

Not on your lists

23201..23398
DNA (198bp) protein (66aa)
Preprotein translocase, SecE subunit n=3 Tax=root RepID=B0MVW1_9BACT
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:EKC51930.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Preprotein translocase subunit SecE
L2_022_000M1_scaffold_318_25
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23410..23970
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=1 Tax=Alistipes sp. CAG:268 RepID=R6VTZ0_9BACT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
transcription antitermination protein nusG
L2_022_000M1_scaffold_318_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


23987..24427
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=2 Tax=Alistipes RepID=I3YMY1_ALIFI
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_022_000M1_scaffold_318_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


24433..25131
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Alistipes RepID=I3YMY2_ALIFI
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_022_000M1_scaffold_318_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


25149..25670
DNA (522bp) protein (174aa)
Ribosomal protein L10 n=2 Tax=Alistipes RepID=B0MVV7_9BACT
Ribosomal protein L10 {ECO:0000313|EMBL:EDS03487.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
LSU ribosomal protein L10P
L2_022_000M1_scaffold_318_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25713..26090
DNA (378bp) protein (126aa)
50S ribosomal protein L7 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000312A2BC
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
50S ribosomal protein L12
L2_022_000M1_scaffold_318_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26323..30183
DNA (3861bp) protein (1287aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA-directed RNA polymerase subunit beta n=4 Tax=root RepID=I3YMY5_ALIFI
DNA-directed RNA polymerase subunit beta
Displaying items 1-30 of 90 in total

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