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L2_022_000M1_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_320_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..283
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XHQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19152.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_022_000M1_scaffold_320_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

317..2320
DNA (2004bp) protein (668aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=F7JHZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19151.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_022_000M1_scaffold_320_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2323..2973
DNA (651bp) protein (217aa)
Macrolide export ATP-binding/permease MacB n=2 Tax=unclassified Lachnospiraceae RepID=E5XHQ7_9FIRM
Macrolide export ATP-binding/permease MacB {ECO:0000313|EMBL:EFV19150.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC transporter ATP-binding protein
L2_022_000M1_scaffold_320_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3137..4495)
DNA (1359bp) protein (453aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035CAFF6
L2_022_000M1_scaffold_320_5
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4880..7072)
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HVA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU12412.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;"
hypothetical protein
L2_022_000M1_scaffold_320_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7328..9190)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88470.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_022_000M1_scaffold_320_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9324..10634)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KFW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61102.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_022_000M1_scaffold_320_8
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10624..14667)
DNA (4044bp) protein (1348aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JTF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61101.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
chromosome segregation ATPase-like protein
L2_022_000M1_scaffold_320_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14664..15800)
DNA (1137bp) protein (379aa)
TIGR02678 family protein n=8 Tax=Clostridium clostridioforme RepID=N9WV08_9CLOT
TIGR02678 family protein {ECO:0000313|EMBL:ENZ61985.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_022_000M1_scaffold_320_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15803..17272)
DNA (1470bp) protein (490aa)
TIGR02677 family protein n=9 Tax=Clostridium RepID=N9VWA9_9CLOT
TIGR02677 family protein {ECO:0000313|EMBL:ENZ11476.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_022_000M1_scaffold_320_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17354..18661)
DNA (1308bp) protein (436aa)
Putative ATP/GTP-binding protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D6_ROSHA
putative ATP/GTP-binding protein
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:AEN95931.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_022_000M1_scaffold_320_12
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18883..19353)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. AS15 RepID=J4U9V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18807.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
L2_022_000M1_scaffold_320_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19571..20857
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WBI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04214.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted ATPase (AAA+ superfamily)
L2_022_000M1_scaffold_320_14
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(21123..21422)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97623.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_320_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(21497..22498)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97624.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_320_16
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(22511..22879)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97625.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_320_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(22869..24635)
DNA (1767bp) protein (589aa)
Radical SAM additional 4Fe4S-binding domain protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6L2_9FIRM
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:CDA97627.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
radical SAM protein
L2_022_000M1_scaffold_320_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(24625..25782)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EAT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97628.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_320_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(25872..27083)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97629.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_320_20

Not on your lists

comp(27180..27422)
DNA (243bp) protein (81aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TGH3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC68878.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_000M1_scaffold_320_21

Not on your lists

comp(27419..27739)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SWA3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59609.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_000M1_scaffold_320_22
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27994..28509)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GL69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13507.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_022_000M1_scaffold_320_23
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28556..28894)
DNA (339bp) protein (113aa)
Helix-turn-helix n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R0L3_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC36646.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Helix-turn-helix.
L2_022_000M1_scaffold_320_24
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29421..30209)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B288_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ69878.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
L2_022_000M1_scaffold_320_25
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(30632..30934)
DNA (303bp) protein (101aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6L7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA97632.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted transcriptional regulators
L2_022_000M1_scaffold_320_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(30936..32150)
DNA (1215bp) protein (405aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
RNA-splicing ligase RtcB n=2 Tax=root RepID=R6EAT4_9FIRM
hypothetical protein
L2_022_000M1_scaffold_320_27
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(32329..32505)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97634.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_320_28
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists


comp(32722..33201)
DNA (480bp) protein (160aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AKI7_9FIRM
L2_022_000M1_scaffold_320_29
unknown

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comp(33161..33304)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_022_000M1_scaffold_320_30
Methanocorpusculum labreanum, Methanocorpusculum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(33315..34328)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5B202
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN07061.1}; TaxID=410358 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanocorpusculaceae; Methanocorpusculum.;" source="Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z).;"
Displaying items 1-30 of 46 in total

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