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L2_022_000M1_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_332_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153..488)
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJA7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16936.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_332_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(515..829)
DNA (315bp) protein (105aa)
Thioredoxin n=2 Tax=Bacteroides RepID=A5ZJA6_9BACE
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
thioredoxin
L2_022_000M1_scaffold_332_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(895..4701)
DNA (3807bp) protein (1269aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAN3_9BACE
L2_022_000M1_scaffold_332_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4862..5548
DNA (687bp) protein (229aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
phosphatidylserine decarboxylase precursor-related protein (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=3 Tax=Bacteroides RepID=A5ZJA4_9BACE
L2_022_000M1_scaffold_332_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5559..6266
DNA (708bp) protein (236aa)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=3 Tax=Bacteroides RepID=I8UVB3_9BACE
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:CCZ73972.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase
L2_022_000M1_scaffold_332_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6334..6618
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73971.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6622..7059)
DNA (438bp) protein (146aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=3 Tax=Bacteroides RepID=A5ZJA1_9BACE
Cytosine/adenosine deaminases
L2_022_000M1_scaffold_332_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7064..7267)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJA0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16929.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_332_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7365..7730
DNA (366bp) protein (122aa)
UPF0102 protein BACCAC_02983 n=3 Tax=Bacteroides RepID=A5ZJ98_9BACE
UPF0102 protein HMPREF1061_04034 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_332_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7803..8159
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16927.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_332_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8143..8901
DNA (759bp) protein (253aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5US46_9BACE
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:CCZ73966.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_022_000M1_scaffold_332_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8969..10036
DNA (1068bp) protein (356aa)
BF0631 family zinc-dependent metalloproteinase lipoprotein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7D1_9BACE
BF0631 family zinc-dependent metalloproteinase lipoprotein {ECO:0000313|EMBL:CCZ73965.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10066..10725)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5UE76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73964.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10862..12190
DNA (1329bp) protein (443aa)
MATE efflux family protein n=3 Tax=Bacteroides RepID=A5ZJ92_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EDM19722.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA-damage-inducible protein F
L2_022_000M1_scaffold_332_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12245..12955
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uridylate kinase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UZ34_9BACE
putative uridylate kinase
L2_022_000M1_scaffold_332_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13406..14317
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PKF6_9BACE
Putative membrane protein {ECO:0000313|EMBL:EDM19720.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted permease, DMT superfamily
L2_022_000M1_scaffold_332_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14369..14929
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=3 Tax=Bacteroides RepID=A5ZJ89_9BACE
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribosome recycling factor
L2_022_000M1_scaffold_332_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14944..15876
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UE71_9BACE
ribosome-associated GTPase
L2_022_000M1_scaffold_332_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16001..17086
DNA (1086bp) protein (362aa)
Efflux transporter RND family MFP subunit n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U777_9BACE
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCZ73958.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RND family efflux transporter, MFP subunit
L2_022_000M1_scaffold_332_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17099..20131
DNA (3033bp) protein (1011aa)
RND transporter, HAE1 family n=3 Tax=Bacteroides RepID=A5ZJ86_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY16917.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Cation/multidrug efflux pump
L2_022_000M1_scaffold_332_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20128..21474
DNA (1347bp) protein (449aa)
Outer membrane efflux protein n=3 Tax=Bacteroides RepID=A5ZJ85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73956.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
outer membrane protein TolC
L2_022_000M1_scaffold_332_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21577..22737)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7C0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73955.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22844..24481)
DNA (1638bp) protein (546aa)
fumarase (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=2 Tax=Bacteroides caccae RepID=A5ZJ83_9BACE
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDM19713.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_022_000M1_scaffold_332_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24671..26701)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U773_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73953.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26719..27975)
DNA (1257bp) protein (419aa)
GTPase HflX n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UZ19_9BACE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
GTP-binding protein HflX
L2_022_000M1_scaffold_332_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28155..29036)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5US32_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73951.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29050..30675)
DNA (1626bp) protein (542aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZJ79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73950.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_332_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30693..33917)
DNA (3225bp) protein (1075aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides RepID=R5UE62_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ73949.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
TonB-dependent receptor plug
L2_022_000M1_scaffold_332_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34367..35560
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ76_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM19706.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Site-specific recombinase XerD
L2_022_000M1_scaffold_332_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36186..39158
DNA (2973bp) protein (991aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9PKE3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16906.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 41 in total

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