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L2_022_000M1_scaffold_342

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_342_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1849
DNA (1848bp) protein (616aa)
DEAD/DEAH box helicase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF22_9BACE
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDM21538.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Superfamily II DNA and RNA helicases
L2_022_000M1_scaffold_342_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2029..4167)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UQN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73451.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_342_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4187..5542)
DNA (1356bp) protein (452aa)
Hydrophobic domain protein n=3 Tax=Bacteroides RepID=A5ZF20_9BACE
Hydrophobic domain protein {ECO:0000313|EMBL:EDM21536.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted membrane protein
L2_022_000M1_scaffold_342_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5546..7042)
DNA (1497bp) protein (499aa)
Polysaccharide biosynthesis protein n=2 Tax=Bacteroides RepID=A5ZF19_9BACE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDM21535.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_022_000M1_scaffold_342_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7095..7535)
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZF18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17753.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_342_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7664..8695)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Bacteroides RepID=A5ZF17_9BACE
Holliday junction DNA helicase subunit RuvB
L2_022_000M1_scaffold_342_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9041..10273
DNA (1233bp) protein (411aa)
Transporter gate domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UQP1_9BACE
Transporter gate domain protein {ECO:0000313|EMBL:CCZ73456.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
L2_022_000M1_scaffold_342_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10290..10706
DNA (417bp) protein (139aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Endoribonuclease YbeY n=2 Tax=Bacteroides RepID=A5ZF15_9BACE
hypothetical protein
L2_022_000M1_scaffold_342_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10826..11248)
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZF14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73458.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_342_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11254..13977)
DNA (2724bp) protein (908aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDM21529.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM21529.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF13_9BACE
Prolyl oligopeptidase family.
L2_022_000M1_scaffold_342_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13961..16318)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U5Y9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73460.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Dipeptidyl peptidase IV (DPP IV) N-terminal region./Prolyl oligopeptidase family.
L2_022_000M1_scaffold_342_12
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16337..18673)
DNA (2337bp) protein (779aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEO48618.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEO48618.1};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases n=4 Tax=Bacteroides RepID=D6CZ71_9BACE
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
L2_022_000M1_scaffold_342_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18742..20445)
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L4U2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KDS19924.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L2_022_000M1_scaffold_342_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20462..21235)
DNA (774bp) protein (258aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7LSU8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY58543.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_022_000M1_scaffold_342_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21240..22754)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7LSU7_BACOV
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS19926.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
SusD family.
L2_022_000M1_scaffold_342_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22767..26132)
DNA (3366bp) protein (1122aa)
TonB-linked outer membrane protein, SusC/RagA family n=6 Tax=Bacteroides RepID=A7LSU6_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY58545.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_022_000M1_scaffold_342_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26181..27383)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECX8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17769.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Fe2+-dicitrate sensor, membrane component
L2_022_000M1_scaffold_342_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27632..28198)
DNA (567bp) protein (189aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides caccae RepID=A5ZF05_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDM21521.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L2_022_000M1_scaffold_342_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29440..31326
DNA (1887bp) protein (629aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U5V4_9BACE
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glucose-inhibited division protein A
L2_022_000M1_scaffold_342_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31377..31907
DNA (531bp) protein (177aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=3 Tax=Bacteroides RepID=A5ZF03_9BACE
L2_022_000M1_scaffold_342_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31982..33811
DNA (1830bp) protein (610aa)
UvrABC system protein C n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U600_9BACE
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Excinuclease ABC subunit C
L2_022_000M1_scaffold_342_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33946..34398
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF01_9BACE
D-tyrosyl-tRNA(Tyr) deacylase
L2_022_000M1_scaffold_342_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34425..34763
DNA (339bp) protein (113aa)
MazG nucleotide pyrophosphohydrolase domain protein n=3 Tax=Bacteroides RepID=A5ZF00_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73472.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted pyrophosphatase
L2_022_000M1_scaffold_342_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34750..35652
DNA (903bp) protein (301aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXR4_9BACE
L2_022_000M1_scaffold_342_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36057..36734
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PNA3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17778.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_342_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36738..37712)
DNA (975bp) protein (325aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.-)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U605_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73475.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_022_000M1_scaffold_342_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37800..40649
DNA (2850bp) protein (950aa)
DNA polymerase I n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UQR0_9BACE
DNA polymerase I {ECO:0000313|EMBL:CCZ73476.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA polymerase I
L2_022_000M1_scaffold_342_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40914..41309
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZEZ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21511.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_022_000M1_scaffold_342_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41403..42179)
DNA (777bp) protein (259aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides caccae RepID=A5ZEZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17782.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Response regulator of the LytR/AlgR family
Displaying 29 items

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