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L2_022_000M1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_357_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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321..1667
DNA (1347bp) protein (449aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Roseburia intestinalis RepID=D4KJA4_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL10434.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_357_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1720..2190
DNA (471bp) protein (157aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:91 RepID=R6X3L8_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDD01027.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Acetyltransferases
L2_022_000M1_scaffold_357_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2196..2987
DNA (792bp) protein (264aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2U8_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CDD01029.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_357_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2977..3741)
DNA (765bp) protein (255aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA50_9CLOT
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:CDD01031.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Uncharacterized protein involved in copper resistance
L2_022_000M1_scaffold_357_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3751..4830)
DNA (1080bp) protein (360aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=root RepID=R6W2V3_9CLOT
L2_022_000M1_scaffold_357_6

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comp(4856..5098)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=root RepID=K1SU31_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC64117.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_000M1_scaffold_357_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5315..6133
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=root RepID=R6VQV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01038.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_357_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6291..7640
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=3 Tax=root RepID=R6EIV4_9FIRM
L2_022_000M1_scaffold_357_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7790..8797
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01040.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
D-isomer specfic 2-hydroxyacid dehydrogenase
L2_022_000M1_scaffold_357_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9076..9540
DNA (465bp) protein (155aa)
Cell wall teichoic acid glycosylation protein GtcA n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA59_9CLOT
Cell wall teichoic acid glycosylation protein GtcA {ECO:0000313|EMBL:CDD01041.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_357_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9645..10679)
DNA (1035bp) protein (345aa)
Peptidase M42 family n=1 Tax=Clostridium sp. CAG:91 RepID=R6X3N4_9CLOT
Peptidase M42 family {ECO:0000313|EMBL:CDD01042.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
glutamyl aminopeptidase M42 family protein
L2_022_000M1_scaffold_357_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10759..11457)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQW4_9CLOT
L2_022_000M1_scaffold_357_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11615..12106)
DNA (492bp) protein (164aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2W2_9CLOT
L2_022_000M1_scaffold_357_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12199..12663
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01045.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_357_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12764..13363
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01046.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_357_16
unknown

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13504..13617
DNA (114bp) protein (38aa)

This feature has no annotations

L2_022_000M1_scaffold_357_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13669..14133
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X3P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01047.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_357_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14209..14871)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2W5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01049.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_357_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14905..16272)
DNA (1368bp) protein (456aa)
Putative membrane protein n=2 Tax=root RepID=R6VQX2_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD01053.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted membrane protein
L2_022_000M1_scaffold_357_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16324..16722)
DNA (399bp) protein (133aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVQ7_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDD01055.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Methyl-accepting chemotaxis protein
L2_022_000M1_scaffold_357_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16918..17943
DNA (1026bp) protein (342aa)
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA72_9CLOT
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CDD01056.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_022_000M1_scaffold_357_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17960..19240
DNA (1281bp) protein (427aa)
Putative signaling protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQX8_9CLOT
Putative signaling protein {ECO:0000313|EMBL:CDD01058.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
diguanylate cyclase, HAMP domain-containing
L2_022_000M1_scaffold_357_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19252..21183)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01060.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
heparinase II/III-like protein
L2_022_000M1_scaffold_357_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21244..22842)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X3Q8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01062.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
response regulator
L2_022_000M1_scaffold_357_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22876..24681)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2X7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01064.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
integral membrane sensor signal transduction histidine kinase
L2_022_000M1_scaffold_357_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24991..26355
DNA (1365bp) protein (455aa)
Extracellular solute-binding protein family 1 n=2 Tax=root RepID=R6VVR4_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD01065.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
family 1 extracellular solute-binding protein
L2_022_000M1_scaffold_357_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26458..27390
DNA (933bp) protein (311aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA81_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDD01066.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC transporter inner membrane protein
L2_022_000M1_scaffold_357_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27390..28181
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X3R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01067.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_357_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28196..29035
DNA (840bp) protein (280aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EL78_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD01068.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC transporter membrane spanning protein (sugar)
L2_022_000M1_scaffold_357_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29125..30297
DNA (1173bp) protein (391aa)
Putative glucoronyl hydrolase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2Y2_9CLOT
Putative glucoronyl hydrolase {ECO:0000313|EMBL:CDD01069.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
putative glucoronyl hydrolase
Displaying items 1-30 of 33 in total

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