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L2_022_000M1_scaffold_365

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_365_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125..1426)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76856.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
D-alanyl-D-alanine carboxypeptidase
L2_022_000M1_scaffold_365_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1512..2642)
DNA (1131bp) protein (377aa)
TDP-4-keto-6-deoxy-D-glucose transaminase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV8_9FIRM
TDP-4-keto-6-deoxy-D-glucose transaminase {ECO:0000313|EMBL:EES76857.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
TDP-4-keto-6-deoxy-D-glucose transaminase
L2_022_000M1_scaffold_365_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2635..3933)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76858.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbamoylphosphate synthase large subunit (split gene in MJ)
L2_022_000M1_scaffold_365_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3930..4892)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76859.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_365_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4892..5827)
DNA (936bp) protein (312aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.7.8.- 2.4.1.83)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76860.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_365_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6020..6370
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76861.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EamA-like transporter family.
L2_022_000M1_scaffold_365_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6339..6701
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76862.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EamA-like transporter family.
L2_022_000M1_scaffold_365_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6793..8250)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76863.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_022_000M1_scaffold_365_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8450..11035)
DNA (2586bp) protein (862aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79688.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
FOG: Glucan-binding domain (YG repeat)
L2_022_000M1_scaffold_365_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11106..11369)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79687.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphotransferase System HPr (HPr) Family
L2_022_000M1_scaffold_365_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11422..12744)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76866.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_365_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12719..13609)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79683.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00159
L2_022_000M1_scaffold_365_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13734..14831)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79681.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_365_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14828..15262)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79679.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_365_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15406..16110)
DNA (705bp) protein (235aa)
ComF family protein n=2 Tax=Ruminococcus RepID=C6JDX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79678.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amidophosphoribosyltransferase
L2_022_000M1_scaffold_365_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16233..18557)
DNA (2325bp) protein (775aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDX3_9FIRM
L2_022_000M1_scaffold_365_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18576..19565)
DNA (990bp) protein (330aa)
MreB/Mrl family cell shape determining protein n=2 Tax=Ruminococcus RepID=C6JDX5_9FIRM
Cell shape determining protein MreB {ECO:0000313|EMBL:CDD79673.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rod shape-determining protein MreB
L2_022_000M1_scaffold_365_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19819..22659)
DNA (2841bp) protein (947aa)
UvrABC system protein A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ9_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
excinuclease ABC, A subunit
L2_022_000M1_scaffold_365_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22820..23962)
DNA (1143bp) protein (381aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76877.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_365_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23992..24348)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76878.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_365_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24450..26258)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Elongation factor 4 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP07_9FIRM
GTP-binding protein LepA
L2_022_000M1_scaffold_365_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26518..27822)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79664.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage II sporulation protein P (SpoIIP).
L2_022_000M1_scaffold_365_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27901..28815)
DNA (915bp) protein (305aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Germination protease. (EC:3.4.24.78)
Germination protease n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQD4_9FIRM
L2_022_000M1_scaffold_365_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29033..29296
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=2 Tax=Ruminococcus RepID=C6JDY3_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rpsT; 30S ribosomal protein S20
L2_022_000M1_scaffold_365_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29419..30405)
DNA (987bp) protein (329aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDY4_9FIRM
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EES76883.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_365_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30579..31496)
DNA (918bp) protein (306aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Quinolinate synthetase complex, A subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDY5_9FIRM
quinolinate synthetase A
L2_022_000M1_scaffold_365_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31516..32064)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79655.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted small molecule binding protein (contains 3H domain)
L2_022_000M1_scaffold_365_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32139..32990)
DNA (852bp) protein (284aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79653.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_000M1_scaffold_365_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32983..34272)
DNA (1290bp) protein (430aa)
Aspartate oxidase (EC:1.4.3.16)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76887.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_365_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34450..36747)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76888.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA internalization-related competence protein ComEC/Rec2
Displaying items 1-30 of 35 in total

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