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L2_022_000M1_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_373_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1181)
DNA (1179bp) protein (393aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC22_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_373_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1517..3637)
DNA (2121bp) protein (707aa)
Elongation factor G n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC23_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
elongation factor G
L2_022_000M1_scaffold_373_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3655..4125)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=3 Tax=root RepID=C6JC24_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
30S ribosomal protein S7
L2_022_000M1_scaffold_373_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4350..4766)
DNA (417bp) protein (139aa)
30S ribosomal protein S12 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC25_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SSU ribosomal protein S12P
L2_022_000M1_scaffold_373_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5550..6563
DNA (1014bp) protein (338aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77320.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_373_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6677..7777
DNA (1101bp) protein (367aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77361.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_373_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7890..8030)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77362.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L2_022_000M1_scaffold_373_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8030..9259)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77323.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_373_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9273..10091)
DNA (819bp) protein (273aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC30_9FIRM
Serine/threonine phosphatase {ECO:0000313|EMBL:CDD77366.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_000M1_scaffold_373_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10072..11979)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC31_9FIRM
Mitogen-activated protein kinase kinase 2 {ECO:0000313|EMBL:CDD77368.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Serine/threonine protein kinase
L2_022_000M1_scaffold_373_11
unknown

Not on your lists

comp(12067..12222)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_022_000M1_scaffold_373_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12283..16038)
DNA (3756bp) protein (1252aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC32_9FIRM
L2_022_000M1_scaffold_373_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16056..19916)
DNA (3861bp) protein (1287aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=Ruminococcus RepID=C6JC33_9FIRM
L2_022_000M1_scaffold_373_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20126..22216)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77374.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_373_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22304..22675)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=2 Tax=Ruminococcus RepID=C6JC35_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L12P
L2_022_000M1_scaffold_373_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22786..23289)
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH62_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L10P
L2_022_000M1_scaffold_373_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24022..24651)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CER4_9FIRM
L2_022_000M1_scaffold_373_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24699..24881)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76579.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_373_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25072..26172
DNA (1101bp) protein (367aa)
ApbE family lipoprotein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFR1_9FIRM
ApbE family lipoprotein {ECO:0000313|EMBL:CDD76577.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ApbE family lipoprotein
L2_022_000M1_scaffold_373_20
unknown

Not on your lists

comp(26560..26685)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_022_000M1_scaffold_373_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26624..28141)
DNA (1518bp) protein (506aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76305.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_000M1_scaffold_373_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28366..29259)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77335.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GDSL-family lipase/acylhydrolase
L2_022_000M1_scaffold_373_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29232..29486)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77336.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_373_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30156..31796)
DNA (1641bp) protein (547aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKA4_9FIRM
L2_022_000M1_scaffold_373_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31798..32916)
DNA (1119bp) protein (373aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC44_9FIRM
L2_022_000M1_scaffold_373_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32947..33261)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC45_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDD79317.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_373_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33258..35003)
DNA (1746bp) protein (582aa)
Adenylylsulfate reductase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPD7_9FIRM
Adenylylsulfate reductase {ECO:0000313|EMBL:CDD79318.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
adenylylsulfate reductase subunit alpha
L2_022_000M1_scaffold_373_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35115..36173)
DNA (1059bp) protein (353aa)
sulfate ABC transporter, ATP-binding protein (EC:3.6.3.25)
Sulfate ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC47_9FIRM
Sulfate ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES77341.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_373_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36175..36999)
DNA (825bp) protein (275aa)
Sulfate ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN04_9FIRM
Sulfate ABC transporter {ECO:0000313|EMBL:CDD79320.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sulfate ABC transporter, permease protein CysW
L2_022_000M1_scaffold_373_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36999..37835)
DNA (837bp) protein (279aa)
Sulfate ABC transporter, permease CysT n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC49_9FIRM
Sulfate ABC transporter, permease CysT {ECO:0000313|EMBL:EES77343.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sulfate ABC transporter, permease protein CysT
Displaying items 1-30 of 32 in total

View Taxonomy