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L2_022_000M1_scaffold_394

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_394_1
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2..1315)
DNA (1314bp) protein (438aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RDW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10377.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L2_022_000M1_scaffold_394_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1509..1712
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T373_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97167.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_022_000M1_scaffold_394_3
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1690..2361
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIJ2_CLOPH
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX42444.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_022_000M1_scaffold_394_4
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2363..3370
DNA (1008bp) protein (336aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
Integral membrane sensor signal transduction histidine kinase n=7 Tax=Clostridium thermocellum RepID=A3DCU5_CLOTH
periplasmic sensor signal transduction histidine kinase
L2_022_000M1_scaffold_394_5
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3487..4167
DNA (681bp) protein (227aa)
ABC transporter related protein n=7 Tax=Clostridium thermocellum RepID=A3DCU6_CLOTH
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABN51775.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L2_022_000M1_scaffold_394_6
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4167..6683
DNA (2517bp) protein (839aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BDI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETT65990.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
cell division protein FtsX
L2_022_000M1_scaffold_394_7
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6738..7112
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12833.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_022_000M1_scaffold_394_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7886..8500
DNA (615bp) protein (205aa)
Methyltransferase domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8T4_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDP22416.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_022_000M1_scaffold_394_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8502..9110
DNA (609bp) protein (203aa)
Methyltransferase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGM0_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EFQ07659.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_022_000M1_scaffold_394_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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9107..9388
DNA (282bp) protein (94aa)
Metal cation transporter ZIP family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IU43_9FIRM
Metal cation transporter ZIP family {ECO:0000313|EMBL:CCY40256.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_022_000M1_scaffold_394_11
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9919..10653
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AJE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42988.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L2_022_000M1_scaffold_394_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10650..11282
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYW7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99216.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_022_000M1_scaffold_394_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11575..11700
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07366.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_394_14
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

11779..12072
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CJC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66589.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L2_022_000M1_scaffold_394_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12096..13448
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X4B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01297.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
putative efflux protein, MATE family
L2_022_000M1_scaffold_394_16
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

13533..13631
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6EWU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01266.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_394_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

13657..14304
DNA (648bp) protein (216aa)
Ham1 protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EL12_9FIRM
Ham1 protein {ECO:0000313|EMBL:CDB01263.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Xanthosine triphosphate pyrophosphatase
L2_022_000M1_scaffold_394_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

14352..15179
DNA (828bp) protein (276aa)
Putative ATP synthase F0 A subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FGT0_9FIRM
Putative ATP synthase F0 A subunit {ECO:0000313|EMBL:CDB01262.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted membrane protein
L2_022_000M1_scaffold_394_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

15287..16129
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EWT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01261.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_394_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16387..16641
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6EMU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01276.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_394_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16616..17350)
DNA (735bp) protein (245aa)
fabG2; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W3H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01274.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_394_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17568..18482
DNA (915bp) protein (305aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
trxB; thioredoxin-disulfide reductase TrxB (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X489_9CLOT
L2_022_000M1_scaffold_394_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18767..19957
DNA (1191bp) protein (397aa)
NLPC/P60 domain-containing protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VW48_9CLOT
NLPC/P60 domain-containing protein {ECO:0000313|EMBL:CDD01270.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
NLPC/P60 domain-containing protein
L2_022_000M1_scaffold_394_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20590..21117
DNA (528bp) protein (176aa)
SSU ribosomal protein S30P/sigma 54 modulation protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VRI5_9CLOT
SSU ribosomal protein S30P/sigma 54 modulation protein {ECO:0000313|EMBL:CDD01268.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
SSU ribosomal protein S30P/sigma 54 modulation protein
L2_022_000M1_scaffold_394_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21283..22323
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WAQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01266.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
peptidase M23
L2_022_000M1_scaffold_394_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22482..23666
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferases (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=3 Tax=root RepID=R6W3G6_9CLOT
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CDD01264.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_394_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23756..24580
DNA (825bp) protein (275aa)
Enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=3 Tax=root RepID=R6WAP6_9CLOT
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:CDD01261.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_394_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24621..25493
DNA (873bp) protein (291aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase NAD binding domain protein n=2 Tax=root RepID=R6W3G1_9CLOT
3-hydroxyacyl-CoA dehydrogenase NAD binding domain protein {ECO:0000313|EMBL:CDD01259.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_394_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25591..26757
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenases (EC:1.3.8.1)
Acyl-CoA dehydrogenase C-terminal domain protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VW37_9CLOT
Acyl-CoA dehydrogenase C-terminal domain protein {ECO:0000313|EMBL:CDD01255.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_394_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26809..27594
DNA (786bp) protein (262aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Clostridium sp. CAG:91 RepID=R6VRG9_9CLOT
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:CDD01253.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
electron transfer flavoprotein beta-subunit
Displaying items 1-30 of 53 in total

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