ggKbase home page

L2_022_000M1_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_398_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(92..214)
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22156.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_398_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(349..2046)
DNA (1698bp) protein (566aa)
Alpha amylase, catalytic domain protein n=2 Tax=Bacteroides caccae RepID=A5ZCR8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22157.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Glycosidases
L2_022_000M1_scaffold_398_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2096..2902)
DNA (807bp) protein (269aa)
Phospholipase, patatin family n=3 Tax=Bacteroides RepID=A5ZCR7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72074.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L2_022_000M1_scaffold_398_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3018..4523)
DNA (1506bp) protein (502aa)
Ferredoxin-type protein NapF n=2 Tax=Bacteroides caccae RepID=I9EPD9_9BACE
Putative ferredoxin-type protein NapF {ECO:0000313|EMBL:EDM22285.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ferredoxin-type protein
L2_022_000M1_scaffold_398_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4531..5466)
DNA (936bp) protein (312aa)
Tat pathway signal sequence domain protein n=3 Tax=Bacteroides RepID=A5ZCR5_9BACE
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EIY22160.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_398_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5482..5991)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZCR4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22161.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_398_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6155..6868)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U1Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72078.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uncharacterised ArCR, COG2043.
L2_022_000M1_scaffold_398_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6939..7826)
DNA (888bp) protein (296aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=3 Tax=Bacteroides RepID=A5ZCR2_9BACE
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:CCZ72079.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_398_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7911..8444)
DNA (534bp) protein (178aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U210_9BACE
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:CCZ72080.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
methylated-DNA--protein-cysteine methyltransferase
L2_022_000M1_scaffold_398_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8840..10342
DNA (1503bp) protein (501aa)
L-glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5ULQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72081.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_022_000M1_scaffold_398_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10596..10913
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22166.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_398_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11052..11615)
DNA (564bp) protein (188aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bacteroides RepID=A5ZCQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72083.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_022_000M1_scaffold_398_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11689..11853
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q032_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22168.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_022_000M1_scaffold_398_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12118..12363
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72084.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA-binding proteins (RRM domain)
L2_022_000M1_scaffold_398_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12424..13392)
DNA (969bp) protein (323aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U216_9BACE
L2_022_000M1_scaffold_398_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13428..14558)
DNA (1131bp) protein (377aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Bacteroides caccae CAG:21 RepID=R5ULR2_9BACE
succinyl-CoA synthetase beta chain
L2_022_000M1_scaffold_398_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14751..15638)
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UTP0_9BACE
malonyl CoA-ACP transacylase
L2_022_000M1_scaffold_398_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15689..16525)
DNA (837bp) protein (279aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U1Z8_9BACE
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCZ72088.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_022_000M1_scaffold_398_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16867..17598
DNA (732bp) protein (244aa)
Hydrolase, NUDIX family n=3 Tax=Bacteroides RepID=A5ZCQ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72089.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
NUDIX domain.
L2_022_000M1_scaffold_398_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17664..19184
DNA (1521bp) protein (507aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U221_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72090.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_022_000M1_scaffold_398_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19218..20534
DNA (1317bp) protein (439aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
D-xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5ULR7_9BACE
L2_022_000M1_scaffold_398_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20628..22082
DNA (1455bp) protein (485aa)
MFS transporter, SP family n=2 Tax=Bacteroides caccae RepID=A5ZCP8_9BACE
Sugar porter (SP) family MFS transporter {ECO:0000313|EMBL:EIY22177.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
MFS transporter, sugar porter (SP) family
L2_022_000M1_scaffold_398_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22230..23768
DNA (1539bp) protein (513aa)
Hydrolase, carbon-nitrogen family n=3 Tax=Bacteroides RepID=A5ZCP7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72093.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
carbon-nitrogen hydrolase
L2_022_000M1_scaffold_398_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23853..24902)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72094.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_398_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


25113..28601
DNA (3489bp) protein (1163aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZCP5_9BACE
L2_022_000M1_scaffold_398_26
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28637..29017
DNA (381bp) protein (127aa)
DnaK suppressor protein n=23 Tax=Bacteroides RepID=D6D706_9BACE
DnaK suppressor protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ92322.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L2_022_000M1_scaffold_398_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29116..29775
DNA (660bp) protein (220aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
signal peptidase II . Aspartic peptidase. MEROPS family A08 (EC:3.4.23.36)
Lipoprotein signal peptidase n=3 Tax=Bacteroides RepID=A5ZCP3_9BACE
L2_022_000M1_scaffold_398_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29765..30841
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U204_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72098.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_022_000M1_scaffold_398_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30846..31232
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EPG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22184.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_022_000M1_scaffold_398_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31183..31950)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U8Z5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72099.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
tRNA/rRNA methyltransferase
Displaying items 1-30 of 36 in total

View Taxonomy