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L2_022_000M1_scaffold_402

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_402_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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152..262
DNA (111bp) protein (37aa)
Site-specific recombinase XerD n=1 Tax=Roseburia sp. CAG:309 RepID=R6YR00_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD36310.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L2_022_000M1_scaffold_402_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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495..1007
DNA (513bp) protein (171aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV52_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA54905.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1410..6980
DNA (5571bp) protein (1857aa)
Glycosidases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSB4_9FIRM
Glycosidases
Glycosidases {ECO:0000313|EMBL:CBL09766.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_402_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7482..8813
DNA (1332bp) protein (444aa)
aspartyl-tRNA synthetase, archaeal type (EC:6.1.1.23)
Aspartate--tRNA ligase n=2 Tax=Roseburia RepID=C7GFQ3_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDA54902.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8884..9798
DNA (915bp) protein (305aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV46_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:CDA54900.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glutamyl-tRNA(Gln) amidotransferase subunit C
L2_022_000M1_scaffold_402_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9867..11336
DNA (1470bp) protein (490aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.- 6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120, ECO:0000313|EMBL:CBL09764.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSB2_9FIRM
L2_022_000M1_scaffold_402_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11358..12788
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.6 6.3.5.7 6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV36_9FIRM
L2_022_000M1_scaffold_402_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13139..13654
DNA (516bp) protein (172aa)
Predicted HD superfamily hydrolase n=2 Tax=Roseburia intestinalis RepID=D4KSB0_9FIRM
Predicted HD superfamily hydrolase
Predicted HD superfamily hydrolase {ECO:0000313|EMBL:CBL09762.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_402_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13743..15671)
DNA (1929bp) protein (643aa)
ABC transporter, ATP-binding protein n=2 Tax=Roseburia RepID=C7GFP8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU99342.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_000M1_scaffold_402_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15671..17419)
DNA (1749bp) protein (583aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFP7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU99341.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_000M1_scaffold_402_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17543..18043
DNA (501bp) protein (167aa)
Transcriptional regulators n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3D4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL14124.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_402_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18297..20486
DNA (2190bp) protein (730aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CBL09758.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CBL09758.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Roseburia intestinalis RepID=D4KSA6_9FIRM
L2_022_000M1_scaffold_402_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20598..20987
DNA (390bp) protein (130aa)
Thioesterase superfamily n=4 Tax=Roseburia RepID=D4KSA5_9FIRM
Thioesterase superfamily
Thioesterase superfamily {ECO:0000313|EMBL:CDA57312.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20997..21773
DNA (777bp) protein (259aa)
Predicted divalent heavy-metal cations transporter n=3 Tax=Roseburia RepID=D4L3D7_9FIRM
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CDA57311.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted divalent heavy-metal cations transporter
L2_022_000M1_scaffold_402_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21788..22138
DNA (351bp) protein (117aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GFP1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57310.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22150..22920
DNA (771bp) protein (257aa)
Uncharacterized conserved protein n=4 Tax=Roseburia RepID=D4KSA3_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDA57309.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22984..23634
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GFN9_9FIRM
RNAse H family protein {ECO:0000313|EMBL:CDA57308.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
RNAse H family protein
L2_022_000M1_scaffold_402_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23658..24761
DNA (1104bp) protein (368aa)
Transcriptional regulator, GntR family n=5 Tax=Roseburia RepID=D4KSA1_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL14131.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_402_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24765..25283
DNA (519bp) protein (173aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Roseburia intestinalis RepID=D4KSA0_9FIRM
L2_022_000M1_scaffold_402_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25394..25642
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6B2D1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57305.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25672..26745
DNA (1074bp) protein (358aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GGN6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57304.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26810..26941)
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GGN5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57303.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27222..27977
DNA (756bp) protein (252aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3E6_9FIRM
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBL14136.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_402_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28011..29507
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99027.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Putative RNA methylase family UPF0020.
L2_022_000M1_scaffold_402_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29514..32165
DNA (2652bp) protein (884aa)
Diguanylate cyclase (GGDEF) domain n=3 Tax=Roseburia RepID=D4KS94_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL14138.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_402_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32646..33740
DNA (1095bp) protein (365aa)
RelA/SpoT domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGN0_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EEU99025.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Guanosine polyphosphate pyrophosphohydrolases/synthetases
L2_022_000M1_scaffold_402_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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33858..34871
DNA (1014bp) protein (338aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=2 Tax=Roseburia RepID=R6BE40_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_402_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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35110..36903
DNA (1794bp) protein (598aa)
DNA primase (EC:2.7.7.-)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
DNA primase n=3 Tax=Roseburia RepID=D4L3F0_9FIRM
Displaying 28 items

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