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L2_022_000M1_scaffold_433

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_433_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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427..711
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD41_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Co-chaperonin GroES (HSP10)
L2_022_000M1_scaffold_433_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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857..2476
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=2 Tax=Bacteria RepID=C6JD40_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
chaperonin GroL
L2_022_000M1_scaffold_433_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2837..3340
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76828.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_433_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3450..4907
DNA (1458bp) protein (486aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Ruminococcus RepID=C6JD38_9FIRM
L2_022_000M1_scaffold_433_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5025..5858
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77086.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
N-acetylmuramoyl-L-alanine amidase
L2_022_000M1_scaffold_433_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6102..6815
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77085.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
IMP cyclohydrolase-like protein.
L2_022_000M1_scaffold_433_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6945..8129
DNA (1185bp) protein (395aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76824.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_000M1_scaffold_433_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8764..8997)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76823.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_000M1_scaffold_433_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9168..10307
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003083E84
Uncharacterized protein {ECO:0000313|EMBL:EES77081.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_433_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10457..11740)
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76821.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_000M1_scaffold_433_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12267..13451)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77079.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L2_022_000M1_scaffold_433_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13808..15175
DNA (1368bp) protein (456aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD29_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD80483.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
extracellular solute-binding protein
L2_022_000M1_scaffold_433_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15471..16373
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77077.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
binding-protein-dependent transport system inner membrane protein
L2_022_000M1_scaffold_433_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16377..17225
DNA (849bp) protein (283aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRB6_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD80481.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
binding-protein-dependent transport systems inner membrane component
L2_022_000M1_scaffold_433_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17347..19146
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR55_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_022_000M1_scaffold_433_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19139..20698
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD25_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CDD80479.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
response regulator receiver protein
L2_022_000M1_scaffold_433_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20779..22899
DNA (2121bp) protein (707aa)
Glycoside hydrolase family 3 domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSP5_9FIRM
Glycoside hydrolase family 3 domain-containing protein {ECO:0000313|EMBL:CDD80478.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Beta-glucosidase-related glycosidases
L2_022_000M1_scaffold_433_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22985..24055
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77072.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_433_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24235..25473
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD22_9FIRM
L2_022_000M1_scaffold_433_20
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25649..26464)
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V5Q6_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK48085.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L2_022_000M1_scaffold_433_21
unknown

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26605..26751
DNA (147bp) protein (49aa)

This feature has no annotations

L2_022_000M1_scaffold_433_22
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27086..27745
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AB56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21579.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
DDE endonuclease
L2_022_000M1_scaffold_433_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28221..29375)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MYY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76028.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Putative transposase.
L2_022_000M1_scaffold_433_24
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29368..30234)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MM31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72179.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Site-specific recombinase XerD
L2_022_000M1_scaffold_433_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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30567..30809
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83368.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_433_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30866..31483)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XQ35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17471.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase
L2_022_000M1_scaffold_433_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31528..31980)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZBM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17472.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase
L2_022_000M1_scaffold_433_28
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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32380..33924
DNA (1545bp) protein (515aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKL3_9CLOT
Radical SAM additional 4Fe4S-binding SPASM domain protein {ECO:0000313|EMBL:KFM94994.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Fe-S oxidoreductase
Displaying 28 items

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