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L2_022_000M1_scaffold_441

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_441_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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639..2786
DNA (2148bp) protein (716aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAZ4_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EEV01018.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methyl-accepting chemotaxis protein
L2_022_000M1_scaffold_441_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2943..3590
DNA (648bp) protein (216aa)
Sigma-70 region 2 n=2 Tax=Roseburia RepID=C7GAX2_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EEV01140.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
RNA polymerase sigma factor, sigma-70 family
L2_022_000M1_scaffold_441_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3654..5849
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53659.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L2_022_000M1_scaffold_441_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6141..6962
DNA (822bp) protein (274aa)
Esterase/lipase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU34_9FIRM
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBL10874.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_441_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6967..8193)
DNA (1227bp) protein (409aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Tyrosine--tRNA ligase n=3 Tax=Roseburia intestinalis RepID=D4KK60_9FIRM
L2_022_000M1_scaffold_441_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8265..8678
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BJX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53662.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_441_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8772..9260
DNA (489bp) protein (163aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Roseburia intestinalis RepID=D4KU37_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL10877.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_441_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9263..10693
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53664.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_441_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10893..11732
DNA (840bp) protein (280aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK65_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL10745.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_441_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11808..12647
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ARQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53670.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_441_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12833..13390
DNA (558bp) protein (186aa)
Uncharacterized conserved protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU42_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10882.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_441_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13485..14480
DNA (996bp) protein (332aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Biotin synthase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU44_9FIRM
L2_022_000M1_scaffold_441_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14551..15234
DNA (684bp) protein (228aa)
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336, ECO:0000313|EMBL:CBL10885.1};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU45_9FIRM
L2_022_000M1_scaffold_441_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15316..16506
DNA (1191bp) protein (397aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme n=2 Tax=Roseburia RepID=D4KU46_9FIRM
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme {ECO:0000313|EMBL:CDA53674.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_441_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16591..16806
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GAV9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53675.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_441_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16810..19191)
DNA (2382bp) protein (794aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit (EC:1.2.7.1)
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAV8_9FIRM
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein {ECO:0000313|EMBL:EEV01126.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_441_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19191..20312)
DNA (1122bp) protein (374aa)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family (EC:1.2.7.1)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:CBL10754.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBL10754.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK74_9FIRM
L2_022_000M1_scaffold_441_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20494..21621
DNA (1128bp) protein (376aa)
Transporter, YbiR family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK75_9FIRM
transporter, YbiR family
Transporter, YbiR family {ECO:0000313|EMBL:CBL10755.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_441_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21640..22500
DNA (861bp) protein (287aa)
Permeases of the drug/metabolite transporter (DMT) superfamily n=2 Tax=Roseburia intestinalis RepID=D4KU51_9FIRM
Permeases of the drug/metabolite transporter (DMT) superfamily
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CBL10891.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_441_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22690..23304
DNA (615bp) protein (205aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CBL10757.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CBL10757.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK77_9FIRM
L2_022_000M1_scaffold_441_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23285..23980
DNA (696bp) protein (232aa)
RelA/SpoT domain protein n=2 Tax=Roseburia RepID=C7GAV0_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CDA53683.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_441_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24132..25139
DNA (1008bp) protein (336aa)
Phosphate ABC transporter phosphate-binding protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ARR6_9FIRM
Phosphate ABC transporter phosphate-binding protein {ECO:0000313|EMBL:CDA53685.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L2_022_000M1_scaffold_441_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25275..26129
DNA (855bp) protein (285aa)
Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) n=4 Tax=Roseburia RepID=D4KK82_9FIRM
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EEV01115.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_441_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26145..27038
DNA (894bp) protein (298aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAU6_9FIRM
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EEV01114.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_441_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27053..27805
DNA (753bp) protein (251aa)
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000313|EMBL:CBL10764.1};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) n=4 Tax=Roseburia RepID=D4KK84_9FIRM
L2_022_000M1_scaffold_441_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27802..28554
DNA (753bp) protein (251aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU59_9FIRM
phosphate uptake regulator, PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_441_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28733..30493
DNA (1761bp) protein (587aa)
Na/Pi-cotransporter n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B3Z8_9FIRM
Na/Pi-cotransporter {ECO:0000313|EMBL:CDA53691.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Na/Pi-cotransporter
L2_022_000M1_scaffold_441_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30523..31194
DNA (672bp) protein (224aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BK07_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDA53692.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_000M1_scaffold_441_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31191..32504
DNA (1314bp) protein (438aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBL10768.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Signal transduction histidine kinase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK88_9FIRM
L2_022_000M1_scaffold_441_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32586..33125
DNA (540bp) protein (180aa)
Superfamily II DNA/RNA helicases, SNF2 family n=4 Tax=Roseburia RepID=D4KK89_9FIRM
Superfamily II DNA/RNA helicases, SNF2 family
Superfamily II DNA/RNA helicases SNF2 family {ECO:0000313|EMBL:CDA53694.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying 30 items

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