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L2_022_000M1_scaffold_500

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_500_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(736..1113)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=4 Tax=Roseburia RepID=D4KM99_9FIRM
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1202..1765)
DNA (564bp) protein (188aa)
50S ribosomal protein L10 n=2 Tax=Roseburia RepID=C7G6S3_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
rplJ; 50S ribosomal protein L10
L2_022_000M1_scaffold_500_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2088..2783)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=4 Tax=Roseburia RepID=D4KM98_9FIRM
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_500_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2922..3347)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=4 Tax=Roseburia RepID=D4KM97_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_500_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3418..3936)
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=4 Tax=Roseburia RepID=D4KM96_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3954..4169)
DNA (216bp) protein (72aa)
Protein translocase subunit SecE n=4 Tax=Roseburia RepID=D4KM95_9FIRM
protein translocase subunit secE/sec61 gamma
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_500_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4671..6026
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G6T0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12555.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_500_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6119..7303)
DNA (1185bp) protein (395aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BME0_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA54507.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_500_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7394..8659)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KM91_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07993.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8678..10264)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54504.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_022_000M1_scaffold_500_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10337..11488)
DNA (1152bp) protein (384aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYW1_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL12551.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_500_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11555..12169)
DNA (615bp) protein (205aa)
Predicted AAA-ATPase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM88_9FIRM
Predicted AAA-ATPase.
Predicted AAA-ATPase {ECO:0000313|EMBL:CBL07990.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12404..13126)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM87_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07989.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13129..14328)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM86_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07988.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14431..15258)
DNA (828bp) protein (276aa)
Flagellin and related hook-associated proteins n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM85_9FIRM
Flagellin and related hook-associated proteins
Flagellin and related hook-associated proteins {ECO:0000313|EMBL:CBL07987.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15343..16488)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM84_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07986.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_500_17
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(16518..17213)
DNA (696bp) protein (232aa)
Serine acetyltransferase {ECO:0000313|EMBL:EAA24614.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EAA24614.1};; TaxID=209882 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. vincentii ATCC 49256.;"
Serine acetyltransferase n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P749_FUSNV
serine acetyltransferase
L2_022_000M1_scaffold_500_18
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17210..18241)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J9D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT23616.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Fe-S oxidoreductase containing radical SAM domain
L2_022_000M1_scaffold_500_19
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18252..19442)
DNA (1191bp) protein (397aa)
DegT/DnrJ/EryC1/StrS family aminotransferase (EC:2.6.1.-)
Aminotransferase DegT/DnrJ/EryC1/StrS family n=1 Tax=Clostridium sp. CAG:230 RepID=R6DJ58_9CLOT
Aminotransferase DegT/DnrJ/EryC1/StrS family {ECO:0000313|EMBL:CDA88533.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
L2_022_000M1_scaffold_500_20
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(19429..20628)
DNA (1200bp) protein (400aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W1U4_9CLOT
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KHM52673.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
polysaccharide biosynthesis protein
L2_022_000M1_scaffold_500_21
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20628..22433)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IUI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT23617.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
IlvB; thiamine pyrophosphate-requiring enzyme
L2_022_000M1_scaffold_500_22
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22438..23478)
DNA (1041bp) protein (347aa)
Nucleotidyl transferase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV15_CLOSD
Nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:CBH20495.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L2_022_000M1_scaffold_500_23
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23492..24379)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BFC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ37110.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
NAD dependent epimerase/dehydratase family
L2_022_000M1_scaffold_500_24
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(24398..25582)
DNA (1185bp) protein (395aa)
Glycosyl transferase family 2 n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N5C1_9FIRM
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDF07766.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L2_022_000M1_scaffold_500_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25728..26477)
DNA (750bp) protein (250aa)
Transposase IS4 family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5R5_9FIRM
Transposase IS4 family {ECO:0000313|EMBL:CCY32347.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
transposase IS4 family protein
L2_022_000M1_scaffold_500_26
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26704..27867)
DNA (1164bp) protein (388aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADL33177.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ADL33177.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RZI0_BUTPB
L2_022_000M1_scaffold_500_27
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27864..28862)
DNA (999bp) protein (333aa)
neuB1; N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase NeuB1 {ECO:0000313|EMBL:ADL33176.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ADL33176.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
N-acetylneuraminate synthase NeuB1 n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RZH9_BUTPB
L2_022_000M1_scaffold_500_28
Neisseria sicca, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28930..29454)
DNA (525bp) protein (175aa)
Methionyl-tRNA formyltransferase family protein n=1 Tax=Neisseria sicca VK64 RepID=I2NDJ8_NEISI
Methionyl-tRNA formyltransferase family protein {ECO:0000313|EMBL:EIG23909.1}; TaxID=1095748 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sicca VK64.;"
formyl transferase
Displaying 28 items

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