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L2_022_000M1_scaffold_523

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_523_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..292
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01098.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_022_000M1_scaffold_523_2
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

646..1983
DNA (1338bp) protein (446aa)
Potassium uptake protein, TrkH family n=2 Tax=root RepID=A8SNV0_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDP27782.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Trk-type K+ transport systems, membrane components
L2_022_000M1_scaffold_523_3
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1999..2646
DNA (648bp) protein (216aa)
TrkA N-terminal domain protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SNU9_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:EDP27781.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
K+ transport systems, NAD-binding component
L2_022_000M1_scaffold_523_4
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2662..2916
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SNU8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK83201.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L2_022_000M1_scaffold_523_5
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2976..4952
DNA (1977bp) protein (659aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK83200.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
Osmosensitive K+ channel histidine kinase n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HE67_9FIRM
L2_022_000M1_scaffold_523_6
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4945..5646
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PRM6_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC12437.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_000M1_scaffold_523_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5668..6240
DNA (573bp) protein (191aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZE90_EUBR3
hypothetical protein
L2_022_000M1_scaffold_523_8

Not on your lists

6441..6758
DNA (318bp) protein (106aa)
Chromate transport protein n=2 Tax=root RepID=G2T0Y6_ROSHA
chromate transport protein
Chromate transporter {ECO:0000313|EMBL:EKC63085.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_000M1_scaffold_523_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7153..7416
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24081.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L2_022_000M1_scaffold_523_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7364..7801)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97946.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_523_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

8101..8889
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EDM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97945.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_523_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9233..9688
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MRR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02388.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
MutT-like (Nudix) hydrolase
L2_022_000M1_scaffold_523_13

Not on your lists

9903..10253
DNA (351bp) protein (117aa)
ArsC family protein n=1 Tax=human gut metagenome RepID=K1S3I0_9ZZZZ
ArsC family protein {ECO:0000313|EMBL:EKC49949.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_000M1_scaffold_523_14

Not on your lists

10270..10821
DNA (552bp) protein (184aa)
Flavin reductase domain-containing protein n=2 Tax=root RepID=R6EBM4_9FIRM
Flavoredoxin {ECO:0000313|EMBL:EKC49948.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flavin reductase domain-containing protein
L2_022_000M1_scaffold_523_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(10845..12353)
DNA (1509bp) protein (503aa)
Methyl-accepting chemotaxis protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F7D1_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA97942.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Methyl-accepting chemotaxis protein
L2_022_000M1_scaffold_523_16
unknown

Not on your lists

12470..12598
DNA (129bp) protein (43aa)

This feature has no annotations

L2_022_000M1_scaffold_523_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

12570..14909
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97941.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ferrous iron transporter FeoB
L2_022_000M1_scaffold_523_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(15033..15908)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EDL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97940.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LysR family transcriptional regulator
L2_022_000M1_scaffold_523_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

16111..17448
DNA (1338bp) protein (446aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBL9_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sodium:neurotransmitter symporter
L2_022_000M1_scaffold_523_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

17630..19087
DNA (1458bp) protein (486aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMC3_9FIRM
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDA97936.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_523_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

19248..20183
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EDK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97930.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_523_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

20207..22366
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QVQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32688.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative helicase
L2_022_000M1_scaffold_523_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22604..23266
DNA (663bp) protein (221aa)
CRISPR-associated protein cas5, subtype I-c/dvulg n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XVD7_9FIRM
CRISPR-associated protein cas5, subtype I-c/dvulg {ECO:0000313|EMBL:EPD56031.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
CRISPR-associated protein, Csd5d family
L2_022_000M1_scaffold_523_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23263..24993
DNA (1731bp) protein (577aa)
CRISPR-associated protein, Csd1 family n=2 Tax=Ruminococcus lactaris RepID=B5CP00_9FIRM
CRISPR-associated protein cas8c/csd1, subtype I-c/dvulg {ECO:0000313|EMBL:ETD17848.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
CRISPR-associated protein, Csd1 family
L2_022_000M1_scaffold_523_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24994..25905
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33506.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_022_000M1_scaffold_523_26
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25905..26570
DNA (666bp) protein (222aa)
CRISPR-associated protein cas4 n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YW73_9FIRM
CRISPR-associated protein cas4 {ECO:0000313|EMBL:EPD56034.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
CRISPR-associated exonuclease, Cas4 family
L2_022_000M1_scaffold_523_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26567..27598
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B808_RUMGN
CRISPR-associated protein, Cas1 family
L2_022_000M1_scaffold_523_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27607..27897
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZG14_EUBR3
hypothetical protein
Displaying 28 items

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