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L2_022_000M1_scaffold_560

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_560_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..855)
DNA (855bp) protein (285aa)
Nucleoside-diphosphate-sugar epimerases (EC:5.1.3.2)
NAD dependent epimerase/reductase-related protein n=3 Tax=Bacteroides RepID=D7JXZ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN04741.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L2_022_000M1_scaffold_560_2
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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900..1502
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=D4WNJ0_BACOV
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI39348.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L2_022_000M1_scaffold_560_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1565..2728
DNA (1164bp) protein (388aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=C3QS11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY57377.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Fe2+-dicitrate sensor, membrane component
L2_022_000M1_scaffold_560_4
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2880..6470
DNA (3591bp) protein (1197aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JY01_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:EFI39350.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L2_022_000M1_scaffold_560_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6494..8062
DNA (1569bp) protein (523aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8Y2N2_BACOV
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS20161.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
SusD family.
L2_022_000M1_scaffold_560_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8084..8980
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6J8V5_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EFF49884.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_022_000M1_scaffold_560_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8993..10309
DNA (1317bp) protein (439aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI4_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF49883.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_022_000M1_scaffold_560_8
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10317..11357
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JY05_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI39354.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L2_022_000M1_scaffold_560_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11361..12494
DNA (1134bp) protein (378aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI2_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF49881.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fibrobacter succinogenes major domain (Fib_succ_major).
L2_022_000M1_scaffold_560_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12530..13678
DNA (1149bp) protein (383aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI1_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF49880.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fibrobacter succinogenes major domain (Fib_succ_major).
L2_022_000M1_scaffold_560_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13919..16075
DNA (2157bp) protein (719aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI0_BACOV
L2_022_000M1_scaffold_560_12
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16121..16639
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JIP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB57671.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Predicted flavin-nucleotide-binding protein
L2_022_000M1_scaffold_560_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16903..19305
DNA (2403bp) protein (801aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNH8_BACOV
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EFF49877.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L2_022_000M1_scaffold_560_14
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19742..21466)
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JY12_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI39361.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L2_022_000M1_scaffold_560_15
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22080..26051
DNA (3972bp) protein (1324aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QS22_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EEO54604.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Signal transduction histidine kinase
Displaying 15 items

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