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L2_022_000M1_scaffold_683

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_683_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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251..652
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=2 Tax=Ruminococcus RepID=C6JFZ1_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribosomal protein S8
L2_022_000M1_scaffold_683_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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741..1280
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=2 Tax=Ruminococcus RepID=C6JFZ2_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L6P
L2_022_000M1_scaffold_683_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1298..1666
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=2 Tax=Ruminococcus RepID=C6JFZ3_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L18P
L2_022_000M1_scaffold_683_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1685..2194
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=2 Tax=Ruminococcus RepID=C6JFZ4_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SSU ribosomal protein S5P
L2_022_000M1_scaffold_683_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2210..2392
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=4 Tax=Clostridiales RepID=C6JFZ5_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L30P
L2_022_000M1_scaffold_683_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2536..2976
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Ruminococcus RepID=C6JFZ6_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L15P
L2_022_000M1_scaffold_683_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2976..4292
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=2 Tax=Ruminococcus RepID=C6JFZ7_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
protein translocase subunit secY/sec61 alpha
L2_022_000M1_scaffold_683_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4362..5006
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=2 Tax=Ruminococcus RepID=C6JFZ8_9FIRM
L2_022_000M1_scaffold_683_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5039..5794
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Ruminococcus RepID=C6JFZ9_9FIRM
L2_022_000M1_scaffold_683_10
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5820..6038
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=12 Tax=Clostridiales RepID=D4LMP9_9FIRM
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L2_022_000M1_scaffold_683_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7032..7400
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=5 Tax=Clostridiales RepID=D4LMQ5_9FIRM
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L2_022_000M1_scaffold_683_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7559..7954
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=2 Tax=Ruminococcus RepID=C6JG04_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SSU ribosomal protein S11P
L2_022_000M1_scaffold_683_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7986..8579
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=2 Tax=Ruminococcus RepID=C6JG05_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SSU ribosomal protein S4P
L2_022_000M1_scaffold_683_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8726..9685
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Ruminococcus RepID=C6JG06_9FIRM
DNA-directed RNA polymerase subunit alpha
L2_022_000M1_scaffold_683_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9824..10360
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=2 Tax=Ruminococcus RepID=C6JG07_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L17P
L2_022_000M1_scaffold_683_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10644..11531
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75988.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_683_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11861..13195
DNA (1335bp) protein (445aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76527.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetylmuramyl tripeptide synthase
L2_022_000M1_scaffold_683_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13195..13917
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75990.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glutamine amidotransferase
L2_022_000M1_scaffold_683_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13920..14561
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76524.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_683_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14587..16119
DNA (1533bp) protein (511aa)
Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGS3_9FIRM
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:CDD76523.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type xylose transport system, periplasmic component
L2_022_000M1_scaffold_683_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16167..16739)
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFL1_9FIRM
L2_022_000M1_scaffold_683_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17092..17319
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75995.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_683_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17450..17797
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76520.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_683_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17819..18010
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LK10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98798.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_683_25
unknown

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18007..18114
DNA (108bp) protein (36aa)

This feature has no annotations

L2_022_000M1_scaffold_683_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18098..18928
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76519.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPases involved in chromosome partitioning
L2_022_000M1_scaffold_683_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19005..19883)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76518.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L2_022_000M1_scaffold_683_28
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20142..21407
DNA (1266bp) protein (422aa)
Phosphomannomutase n=1 Tax=Dialister invisus CAG:218 RepID=R5TC61_9FIRM
Phosphomannomutase {ECO:0000313|EMBL:CCZ54707.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
phosphoglucomutase
Displaying 28 items

View Taxonomy