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L2_022_000M1_scaffold_742

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_742_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..632
DNA (630bp) protein (210aa)
Haloacid dehalogenase IA family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV82_9FIRM
Haloacid dehalogenase IA family protein {ECO:0000313|EMBL:CDA54935.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L2_022_000M1_scaffold_742_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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735..1310
DNA (576bp) protein (192aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Sortase and related acyltransferases n=4 Tax=Roseburia RepID=D4KNT4_9FIRM
Sortase and related acyltransferases {ECO:0000313|EMBL:CDA54936.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_742_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1355..2329
DNA (975bp) protein (325aa)
Mg2+ and Co2+ transporters n=4 Tax=Roseburia RepID=D4KNT5_9FIRM
Mg2+ and Co2+ transporters
Mg2+ and Co2+ transporters {ECO:0000313|EMBL:CBL08537.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_742_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2415..3275)
DNA (861bp) protein (287aa)
Predicted SAM-dependent methyltransferases n=2 Tax=Roseburia intestinalis RepID=D4KNT6_9FIRM
Predicted SAM-dependent methyltransferases
Predicted SAM-dependent methyltransferases {ECO:0000313|EMBL:CBL11040.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3348..4787)
DNA (1440bp) protein (480aa)
Trk-type K+ transport systems, membrane components n=3 Tax=Roseburia RepID=D4KNT7_9FIRM
Trk-type K+ transport systems, membrane components
Trk-type K+ transport systems membrane components {ECO:0000313|EMBL:CDA54939.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_742_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4794..6152)
DNA (1359bp) protein (453aa)
K+ transport systems, NAD-binding component n=2 Tax=Roseburia intestinalis RepID=D4KNT8_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBL11038.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6946..7263
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=3 Tax=Roseburia RepID=D4KNT9_9FIRM
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_742_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7449..8132
DNA (684bp) protein (228aa)
50S ribosomal protein L3 n=4 Tax=Roseburia RepID=D4KNU0_9FIRM
LSU ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8160..8780
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=4 Tax=Roseburia RepID=D4KNU1_9FIRM
LSU ribosomal protein L4P
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_742_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8780..9079
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=4 Tax=Roseburia RepID=D4KNU2_9FIRM
Ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9149..9994
DNA (846bp) protein (282aa)
50S ribosomal protein L2 n=4 Tax=Roseburia RepID=D4KNU3_9FIRM
LSU ribosomal protein L2P
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10237..10518
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=3 Tax=Roseburia intestinalis RepID=D4KNU4_9FIRM
SSU ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_742_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10543..10929
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=3 Tax=Roseburia intestinalis RepID=D4KNU5_9FIRM
LSU ribosomal protein L22P
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10941..11597
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=3 Tax=root RepID=D4KNU6_9FIRM
SSU ribosomal protein S3P
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_742_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11597..12034
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=4 Tax=Roseburia RepID=D4KNU7_9FIRM
LSU ribosomal protein L16P
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_742_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12024..12233
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=3 Tax=Roseburia intestinalis RepID=D4KNU8_9FIRM
LSU ribosomal protein L29P
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12260..12517
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCZ6_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
30S ribosomal protein S17
L2_022_000M1_scaffold_742_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12536..12904
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Roseburia intestinalis RepID=D4KNU9_9FIRM
LSU ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_742_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12917..13228
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=3 Tax=Roseburia RepID=D4KNV0_9FIRM
LSU ribosomal protein L24P
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_742_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13251..13790
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Roseburia RepID=C7GCZ3_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
rplE; 50S ribosomal protein L5
L2_022_000M1_scaffold_742_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13806..13991
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=3 Tax=Roseburia RepID=D4KNV1_9FIRM
Ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_742_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14052..14453
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=4 Tax=Roseburia RepID=D4KNV2_9FIRM
Ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14657..15196
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5L7_ROSHA
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_022_000M1_scaffold_742_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15215..15583
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=4 Tax=Roseburia RepID=D4KNV3_9FIRM
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_742_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15602..16111
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=3 Tax=Roseburia RepID=D4KNV4_9FIRM
SSU ribosomal protein S5P
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_742_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16126..16311
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=4 Tax=Roseburia RepID=D4KNV5_9FIRM
LSU ribosomal protein L30P
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16336..16776
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=4 Tax=Roseburia RepID=D4KNV6_9FIRM
LSU ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_742_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16776..18092
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=4 Tax=Roseburia RepID=D4KNV7_9FIRM
protein translocase subunit secY/sec61 alpha
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_742_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18300..18944
DNA (645bp) protein (215aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Adenylate kinase n=3 Tax=Roseburia RepID=D4KNV9_9FIRM
L2_022_000M1_scaffold_742_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18958..19722
DNA (765bp) protein (255aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methionine aminopeptidase n=2 Tax=Roseburia intestinalis RepID=D4KNW0_9FIRM
Displaying items 1-30 of 31 in total

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