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L2_022_000M1_scaffold_765

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_765_1
unknown

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3..128
DNA (126bp) protein (42aa)

This feature has no annotations

L2_022_000M1_scaffold_765_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(98..1552)
DNA (1455bp) protein (485aa)
Site-specific recombinase phage integrase family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z6V4_9BACT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDD26247.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
site-specific recombinase XerD
L2_022_000M1_scaffold_765_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1730..2653)
DNA (924bp) protein (308aa)
DNA-binding protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003828D18
DNA-binding domain-containing protein AraC-type {ECO:0000313|EMBL:CDD26248.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA-binding domain-containing protein
L2_022_000M1_scaffold_765_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2761..3633)
DNA (873bp) protein (291aa)
lipid kinase n=1 Tax=Alistipes onderdonkii RepID=UPI00037E6FC6
Lipid kinase YegS/Rv2252/BmrU family {ECO:0000313|EMBL:CDD26249.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_765_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3641..4651)
DNA (1011bp) protein (337aa)
ApbE family protein n=1 Tax=Alistipes onderdonkii RepID=UPI000365252C
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:CDD26250.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
membrane-associated lipoprotein
L2_022_000M1_scaffold_765_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4844..5116
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=1 Tax=Alistipes onderdonkii RepID=UPI00036D75E2
SSU ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_022_000M1_scaffold_765_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5211..7445
DNA (2235bp) protein (745aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
polynucleotide phosphorylase n=1 Tax=Alistipes onderdonkii RepID=UPI00036DCC5C
polyribonucleotide nucleotidyltransferase
L2_022_000M1_scaffold_765_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7647..9380
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003754F79
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD23986.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_765_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9523..10401
DNA (879bp) protein (293aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
deoxyribose-phosphate aldolase n=1 Tax=Alistipes onderdonkii RepID=UPI0003710F64
deoxyribose-phosphate aldolase
L2_022_000M1_scaffold_765_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11084..11308)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000375A41B
Uncharacterized protein {ECO:0000313|EMBL:CDD23984.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_765_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11301..12938)
DNA (1638bp) protein (546aa)
peptidase n=1 Tax=Alistipes onderdonkii RepID=UPI00037BC62A
C-terminal processing peptidase {ECO:0000313|EMBL:CDD23983.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
C-terminal processing peptidase
L2_022_000M1_scaffold_765_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12969..14147)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037B7EFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR58595.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_022_000M1_scaffold_765_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14243..15088
DNA (846bp) protein (282aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
apurinic endonuclease APN1 (EC:3.1.21.-)
Probable endonuclease 4 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z0G5_9BACT
L2_022_000M1_scaffold_765_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15280..16482)
DNA (1203bp) protein (401aa)
aminotransferase class III n=1 Tax=Alistipes onderdonkii RepID=UPI0003606091
Ornithine/acetylornithine aminotransferase {ECO:0000313|EMBL:CDD23981.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ornithine/acetylornithine aminotransferase
L2_022_000M1_scaffold_765_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16479..17174)
DNA (696bp) protein (232aa)
rRNA methyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00037DC298
rRNA methylase {ECO:0000313|EMBL:CDD23980.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
rRNA methylase
L2_022_000M1_scaffold_765_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17149..18069)
DNA (921bp) protein (307aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
GTPase RsgA n=1 Tax=Alistipes onderdonkii RepID=UPI000374377C
ribosome small subunit-dependent GTPase A
L2_022_000M1_scaffold_765_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18073..18585)
DNA (513bp) protein (171aa)
Putative membrane protein required for colicin V production n=1 Tax=Alistipes sp. CAG:29 RepID=R6XK53_9BACT
Putative membrane protein required for colicin V production {ECO:0000313|EMBL:CDD23978.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_765_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18703..18921)
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=2 Tax=Alistipes RepID=R6Z0G0_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD23977.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L2_022_000M1_scaffold_765_19
unknown

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18978..19100
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 19 items

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