ggKbase home page

L2_022_000M1_scaffold_884

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_884_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)
Uncharacterized protein (Fragment) n=1 Tax=Bacteroides stercoris CC31F RepID=S3Z7G4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH16735.1}; Flags: Fragment;; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L2_022_000M1_scaffold_884_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(104..277)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R0W8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY68768.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_022_000M1_scaffold_884_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

415..1194
DNA (780bp) protein (260aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E5CGE5_9BACE
Putative membrane protein {ECO:0000313|EMBL:EFF53128.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_022_000M1_scaffold_884_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1305..2165)
DNA (861bp) protein (287aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=3 Tax=Bacteroides RepID=D4WE86_BACOV
L2_022_000M1_scaffold_884_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2198..3328)
DNA (1131bp) protein (377aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Bacteroides RepID=D4WE87_BACOV
L2_022_000M1_scaffold_884_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3389..4231)
DNA (843bp) protein (281aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Bacteroides RepID=D4WE88_BACOV
L2_022_000M1_scaffold_884_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4198..5043)
DNA (846bp) protein (282aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=2 Tax=Bacteroides RepID=D4WE89_BACOV
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EIY86842.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L2_022_000M1_scaffold_884_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5384..6115
DNA (732bp) protein (244aa)
NUDIX domain n=17 Tax=Bacteroides RepID=D6D734_9BACE
NUDIX domain.
Uncharacterized protein {ECO:0000313|EMBL:EGN00351.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L2_022_000M1_scaffold_884_9
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6242..7765
DNA (1524bp) protein (508aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=2 Tax=Bacteroides RepID=D4WE91_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY86840.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L2_022_000M1_scaffold_884_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7808..9124
DNA (1317bp) protein (439aa)
D-xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Xylose isomerase n=17 Tax=Bacteroides RepID=D6D732_9BACE
L2_022_000M1_scaffold_884_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9263..10717
DNA (1455bp) protein (485aa)
MFS transporter, sugar porter (SP) family protein n=2 Tax=Bacteroides RepID=D4WE93_BACOV
MFS transporter, sugar porter (SP) family protein {ECO:0000313|EMBL:EFF53136.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
MFS transporter, sugar porter (SP) family
L2_022_000M1_scaffold_884_12
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10960..11829
DNA (870bp) protein (290aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3R0V6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86837.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Peptidylarginine deiminase and related enzymes
L2_022_000M1_scaffold_884_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11837..12307
DNA (471bp) protein (157aa)
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) n=3 Tax=Bacteroides RepID=C3R0V5_9BACE
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) {ECO:0000313|EMBL:EFF53138.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_022_000M1_scaffold_884_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12392..13129
DNA (738bp) protein (246aa)
Conserved domain protein n=2 Tax=Bacteroides RepID=D4WE96_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY86835.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L2_022_000M1_scaffold_884_15
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13176..14069)
DNA (894bp) protein (298aa)
Transcriptional regulator, effector binding domain protein n=2 Tax=Bacteroides RepID=C3R0V3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86834.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
DNA gyrase inhibitor
L2_022_000M1_scaffold_884_16
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14393..14512)
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D727_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65822.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L2_022_000M1_scaffold_884_17
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14608..16146
DNA (1539bp) protein (513aa)
Hydrolase, carbon-nitrogen family n=2 Tax=Bacteroides RepID=D4WM43_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY86833.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
carbon-nitrogen hydrolase
L2_022_000M1_scaffold_884_18
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16244..17293)
DNA (1050bp) protein (350aa)
Inner membrane protein YhiM n=2 Tax=Bacteroides RepID=D7JBK6_9BACE
Inner membrane protein YhiM {ECO:0000313|EMBL:EFI11032.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Protein of unknown function (DUF2776).
L2_022_000M1_scaffold_884_19
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17504..20122
DNA (2619bp) protein (873aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=3 Tax=Bacteroides RepID=F7LY98_9BACE
L2_022_000M1_scaffold_884_20
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20119..20943
DNA (825bp) protein (275aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Bacteroides ovatus RepID=A7LXH8_BACOV
leucyl tRNA synthetase suspected. See adjacent gene [L2_022_000M1_scaffold_884_19].
L2_022_000M1_scaffold_884_21
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20979..21359
DNA (381bp) protein (127aa)
DnaK suppressor protein n=23 Tax=Bacteroides RepID=D6D706_9BACE
DnaK suppressor protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ92322.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L2_022_000M1_scaffold_884_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21457..22113
DNA (657bp) protein (219aa)
signal peptidase II . Aspartic peptidase. MEROPS family A08 (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Lipoprotein signal peptidase n=15 Tax=Bacteroides RepID=D6D705_9BACE
L2_022_000M1_scaffold_884_23
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22103..23179
DNA (1077bp) protein (359aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QKK3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN06284.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L2_022_000M1_scaffold_884_24
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23185..23571
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7JBL0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI11036.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L2_022_000M1_scaffold_884_25
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23522..24286)
DNA (765bp) protein (255aa)
RNA methyltransferase, TrmH family n=2 Tax=Bacteroides RepID=D7JBL1_9BACE
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFI11037.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
rRNA methylases
L2_022_000M1_scaffold_884_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24430..26739
DNA (2310bp) protein (770aa)
Outer membrane protein, OMP85 family n=5 Tax=Bacteroides RepID=A7LXI5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68787.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Outer membrane protein/protective antigen OMA87
Displaying 26 items

View Taxonomy