ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L2_022_000M1_scaffold_105_11

Organism: L2_022_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(11661..12548)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHG8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 295.0
  • Bit_score: 594
  • Evalue 5.90e-167
Transcriptional regulator {ECO:0000313|EMBL:CDD77410.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 295.0
  • Bit_score: 594
  • Evalue 8.20e-167
AraC-type DNA-binding domain-containing proteins similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 302.0
  • Bit_score: 397
  • Evalue 1.70e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:9 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCAGTTACTCCCACAATCGAAGTAGATGATACTCTGAAAGAACGAAGCTCTCACGGCTCCTTTGAACTTCCCATAGAAACTTATACAGACAACTGCGAAATCTTCCATTCCCTCTACAACCACTGGCATGACGAGATGGAACTGATGTATATTGAATCCGGCAGCGGGCTGGTTCGTCTGAACAAAGAGATCCTTCGCGTCAAGGCCGGTGACCTGATCATTGTGAACCGTGGAGTTCTCCATGGCATAAAAACAGATCTGAAGAATATCCTTTATTTCCGTAGTATTGTTTTTGACCTGAACTTCCTGTCAGGCCCGGCGGGAGATTTATGTCAGGAACGTGTCATTTCCCTGTTGATGGATAATCAGGCGGAATTTACCCATATTATTTCCAGATCTGATGACAATTATGGGAATATCTGCCTGCTTTTTGACAGGATCCATTCCTGCCATAAAGAAAAAAAGCCATATTATTTCGTAAAATTAAAGGCTCTGTTCTTCAGCTTTTTCTACGAAATGCTCATGGGAAATTACATCACTCCCGCAGATAAGGAAGAGAACAAAAGTCTTGCTTCTATTAAAAAAATCCTGGACTACATCAACCTCAATTATTCACAGTCACTGACCGCGGCAGAGCTCACTGCGCTCTCCAATTACAGCGAATACTACTTTATGAAACTGTTTAAGCAATATACCGGCAAGACTCTGATTGCCTACATCAATGACCTGCGCATCGAGAAAGCCAAGCCTCTGCTTCTGCATTCCGACTCCTCTGTCACAGAGATCGCACTGGAAGTAGGTTTCAACAACACCAGCTATTTCATCAAGAAGTTCCAGCAGGCAACCGGAATGTCTCCTCATAAGTTTCGCAGAAACCTGTCATAA
PROTEIN sequence
Length: 296
MPVTPTIEVDDTLKERSSHGSFELPIETYTDNCEIFHSLYNHWHDEMELMYIESGSGLVRLNKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKEENKSLASIKKILDYINLNYSQSLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPLLLHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNLS*