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L2_022_000M1_scaffold_105

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Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_105_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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185..1426
DNA (1242bp) protein (414aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFL6_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EES76199.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tyrosine lyase ThiH
L2_022_000M1_scaffold_105_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1428..2003
DNA (576bp) protein (192aa)
Thiamine monophosphate synthase (EC:2.5.1.3)
Thiamine-phosphate pyrophosphorylase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFL5_9FIRM
Thiamine-phosphate pyrophosphorylase {ECO:0000313|EMBL:EES76198.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_105_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2063..3373)
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphomethylpyrimidine synthase n=2 Tax=Ruminococcus RepID=C6JFL4_9FIRM
thiamine biosynthesis protein ThiC
L2_022_000M1_scaffold_105_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3898..4905)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76196.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
fibronectin type III domain protein
L2_022_000M1_scaffold_105_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5072..5350)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76195.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterised protein family (UPF0150).
L2_022_000M1_scaffold_105_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5503..6309
DNA (807bp) protein (269aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.- 4.2.99.18)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFL1_9FIRM
8-oxoguanine DNA-glycosylase (Ogg) {ECO:0000313|EMBL:EES76194.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_000M1_scaffold_105_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6378..6668
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79785.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_105_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6808..7455)
DNA (648bp) protein (216aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK9_9FIRM
L2_022_000M1_scaffold_105_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7834..9045
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76191.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_105_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9223..11490)
DNA (2268bp) protein (756aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH96_9FIRM
L2_022_000M1_scaffold_105_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11661..12548)
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHG8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD77410.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AraC-type DNA-binding domain-containing proteins
L2_022_000M1_scaffold_105_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12567..13397)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77409.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_022_000M1_scaffold_105_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13381..14313)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77408.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_105_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14314..15036)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76186.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator of the LytR/AlgR family
L2_022_000M1_scaffold_105_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15504..17093)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77406.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_022_000M1_scaffold_105_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17299..18114
DNA (816bp) protein (272aa)
Transglutaminase-like superfamily n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GPA7_9FIRM
Transglutaminase-like superfamily {ECO:0000313|EMBL:CCY14572.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Transglutaminase-like superfamily.
L2_022_000M1_scaffold_105_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18160..19131
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F894E0
Uncharacterized protein {ECO:0000313|EMBL:CDD77402.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_000M1_scaffold_105_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19171..19980
DNA (810bp) protein (270aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77401.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
uncharacterized domain HDIG
L2_022_000M1_scaffold_105_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20047..20628
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76180.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted metal-dependent hydrolase
L2_022_000M1_scaffold_105_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20754..21989
DNA (1236bp) protein (412aa)
TIGR00375 family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFJ6_9FIRM
TIGR00375 family protein {ECO:0000313|EMBL:EES76179.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_000M1_scaffold_105_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22122..22580
DNA (459bp) protein (153aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
MJ0936 family phosphodiesterase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFJ5_9FIRM
phosphoesterase, MJ0936 family
L2_022_000M1_scaffold_105_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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22824..23123
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q2B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21810.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transposase IS4 family protein
L2_022_000M1_scaffold_105_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23871..24425
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04252.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_022_000M1_scaffold_105_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24721..25560
DNA (840bp) protein (280aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium RepID=E9STB5_CLOSY
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ERI74278.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
rpiR; RpiR transcriptional regulator
L2_022_000M1_scaffold_105_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25576..26601
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04259.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative monosaccharide-transporting ATPase
L2_022_000M1_scaffold_105_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26681..28186
DNA (1506bp) protein (502aa)
ribose import ATP-binding protein RbsA (EC:3.6.3.17)
Ribose ABC transporter n=3 Tax=Clostridium RepID=E7GP03_CLOSY
Ribose ABC transporter {ECO:0000313|EMBL:EGA93551.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_022_000M1_scaffold_105_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28179..29144
DNA (966bp) protein (322aa)
Branched-chain amino acid ABC transporter, permease protein n=4 Tax=Clostridium RepID=E9STB8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04257.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ribose transport system permease RbsC
L2_022_000M1_scaffold_105_28
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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29156..30838
DNA (1683bp) protein (561aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;"
Ribulokinase n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IEA5_ALIAT
araB; L-ribulokinase
L2_022_000M1_scaffold_105_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30840..31544
DNA (705bp) protein (235aa)
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STC0_CLOSY
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EGA93554.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L-ribulose-5-phosphate 4-epimerase
L2_022_000M1_scaffold_105_30
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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31525..32145
DNA (621bp) protein (207aa)
SIS domain-containing protein n=1 Tax=Listeria innocua FSL J1-023 RepID=E3Z4W1_LISIO
SIS domain protein
Lin0502 protein {ECO:0000313|EMBL:CAC95734.1}; TaxID=272626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria innocua serovar 6a (strain CLIP 11262).;"
Displaying items 1-30 of 99 in total

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