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L2_022_000M1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_162_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

2..1882
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21845.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
collagen triple helix repeat protein
L2_022_000M1_scaffold_162_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1893..2543
DNA (651bp) protein (217aa)
Glycosyl hydrolase family 25 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZES5_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EFQ08376.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_022_000M1_scaffold_162_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2547..2864
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZES4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08375.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_162_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2882..3223
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZES3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08374.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000M1_scaffold_162_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3384..3725
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07035.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_162_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4043..5272
DNA (1230bp) protein (410aa)
SpoIVB peptidase {ECO:0000313|EMBL:EFQ07241.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFQ07241.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHV4_9FIRM
L2_022_000M1_scaffold_162_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5356..6165
DNA (810bp) protein (270aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHV5_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_000M1_scaffold_162_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6325..7185
DNA (861bp) protein (287aa)
Polysaccharide deacetylase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHV6_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EFQ07243.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted xylanase/chitin deacetylase
L2_022_000M1_scaffold_162_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7200..8045)
DNA (846bp) protein (282aa)
HTH-type transcriptional regulator HmrR n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHV7_9FIRM
HTH-type transcriptional regulator HmrR {ECO:0000313|EMBL:EFQ07244.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted transcriptional regulators
L2_022_000M1_scaffold_162_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8155..9558)
DNA (1404bp) protein (468aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHV8_9FIRM
L2_022_000M1_scaffold_162_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9574..10242)
DNA (669bp) protein (223aa)
Transglycosylase SLT domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHV9_9FIRM
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EFQ07246.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
L2_022_000M1_scaffold_162_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10239..10856)
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW0_9FIRM
L2_022_000M1_scaffold_162_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10853..11890)
DNA (1038bp) protein (346aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW1_9FIRM
translation factor SUA5
L2_022_000M1_scaffold_162_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11968..13050)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW2_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
bacterial peptide chain release factor 1 (bRF-1)
L2_022_000M1_scaffold_162_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13183..13560)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07250.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000M1_scaffold_162_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13600..14535
DNA (936bp) protein (312aa)
S1 RNA binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW4_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EFQ07251.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Ribosomal protein S1
L2_022_000M1_scaffold_162_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14574..15137
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07252.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000M1_scaffold_162_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15401..16891)
DNA (1491bp) protein (497aa)
Stage IV sporulation protein A n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW7_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:EFQ07254.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
stage IV sporulation protein A
L2_022_000M1_scaffold_162_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17628..18962)
DNA (1335bp) protein (445aa)
Aspartyl/asparaginyl-tRNA synthetases (EC:6.1.1.12)
Nucleic acid-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX0_9FIRM
Nucleic acid-binding domain protein {ECO:0000313|EMBL:EFQ07198.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_162_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19191..19814)
DNA (624bp) protein (208aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EFQ07200.1}; EC=2.4.1.- {ECO:0000313|EMBL:EFQ07200.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Bacterial sugar transferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX2_9FIRM
Sugar transferases involved in lipopolysaccharide synthesis
L2_022_000M1_scaffold_162_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20231..22246
DNA (2016bp) protein (672aa)
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:EFQ07201.1}; EC=3.2.1.- {ECO:0000313|EMBL:EFQ07201.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Glycosyl hydrolase, family 31 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX3_9FIRM
L2_022_000M1_scaffold_162_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22452..23819
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFQ07203.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative efflux protein, MATE family
L2_022_000M1_scaffold_162_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23954..24091)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06643.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_162_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24300..24848)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07204.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Acetyltransferase (GNAT) family.
L2_022_000M1_scaffold_162_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25050..25805
DNA (756bp) protein (252aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX8_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ07206.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator, GntR family
L2_022_000M1_scaffold_162_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25822..26763
DNA (942bp) protein (314aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX9_9FIRM
L2_022_000M1_scaffold_162_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26765..27202
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase, regulatory subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K665_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase, regulatory subunit {ECO:0000313|EMBL:CBL03074.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000M1_scaffold_162_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27286..29250)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2W8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97861.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_022_000M1_scaffold_162_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29815..31101)
DNA (1287bp) protein (429aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHY3_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFQ07211.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_022_000M1_scaffold_162_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31094..31816)
DNA (723bp) protein (241aa)
LytTr DNA-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHY4_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFQ07212.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulator of the LytR/AlgR family
Displaying items 1-30 of 75 in total

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