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L2_022_000M1_scaffold_237

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_237_31
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22387..23718
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMI1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFQ05572.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative efflux protein, MATE family
L2_022_000M1_scaffold_237_32
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23911..25302
DNA (1392bp) protein (464aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMI0_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EFQ05571.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid carrier protein
L2_022_000M1_scaffold_237_33
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25471..26424
DNA (954bp) protein (318aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Pyruvate kinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMH8_9FIRM
Pyruvate kinase
L2_022_000M1_scaffold_237_34
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26847..27779
DNA (933bp) protein (311aa)
Kinase, PfkB family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMH7_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EFQ05568.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Sugar kinases, ribokinase family
L2_022_000M1_scaffold_237_35
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27900..28376)
DNA (477bp) protein (159aa)
5-nitroimidazole resistance protein NimA n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMH1_9FIRM
5-nitroimidazole resistance protein NimA {ECO:0000313|EMBL:EFQ05644.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted flavin-nucleotide-binding protein
L2_022_000M1_scaffold_237_36
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28436..28849)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05643.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000M1_scaffold_237_37
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28902..29834)
DNA (933bp) protein (311aa)
Transporter, auxin efflux carrier (AEC) family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG9_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EFQ05642.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted permeases
L2_022_000M1_scaffold_237_38
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29917..30753)
DNA (837bp) protein (279aa)
PRD domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG8_9FIRM
PRD domain protein {ECO:0000313|EMBL:EFQ05641.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional antiterminator BglG
L2_022_000M1_scaffold_237_39
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30811..32265)
DNA (1455bp) protein (485aa)
Glycosyl hydrolase, family 1 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG7_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFQ05640.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
beta-glucosidase
L2_022_000M1_scaffold_237_40
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32262..34136)
DNA (1875bp) protein (625aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EFQ05639.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFQ05639.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
bglF; PTS system beta-glucoside transporter subunit IIABC (EC:2.7.1.69)
PTS system, beta-glucoside-specific, IIABC component n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG6_9FIRM
L2_022_000M1_scaffold_237_41
unknown

Not on your lists

34641..34739
DNA (99bp) protein (33aa)

This feature has no annotations

L2_022_000M1_scaffold_237_42
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34736..35293
DNA (558bp) protein (186aa)
Transcriptional regulator, TetR family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SE46_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDP21102.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Transcriptional regulator
L2_022_000M1_scaffold_237_43
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35437..36111
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PU87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27978.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_022_000M1_scaffold_237_44
unknown

Not on your lists

36232..36330
DNA (99bp) protein (33aa)

This feature has no annotations

L2_022_000M1_scaffold_237_45
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36356..37924
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0B3_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06346.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_022_000M1_scaffold_237_46
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37949..38893
DNA (945bp) protein (315aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB75299.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75299.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPV3_9FIRM
glycosyl transferase family protein
L2_022_000M1_scaffold_237_47
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39129..40337
DNA (1209bp) protein (403aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMF8_9FIRM
L2_022_000M1_scaffold_237_48
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40442..41212
DNA (771bp) protein (257aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG0_9FIRM
L2_022_000M1_scaffold_237_49
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41369..42895
DNA (1527bp) protein (509aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG1_9FIRM
L2_022_000M1_scaffold_237_50
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43335..45917
DNA (2583bp) protein (861aa)
Putative translation elongation factor G n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG2_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EFQ05635.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
small GTP-binding protein domain
L2_022_000M1_scaffold_237_51
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45964..46863
DNA (900bp) protein (300aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMG3_9FIRM
yjeF C-terminal region, hydroxyethylthiazole kinase-related
L2_022_000M1_scaffold_237_52
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46926..47225)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DMH3_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG61734.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L2_022_000M1_scaffold_237_53
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47893..49821)
DNA (1929bp) protein (643aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
UvrD/REP helicase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UDT6_RUMA7
UvrD/REP helicase
L2_022_000M1_scaffold_237_54
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49835..51760)
DNA (1926bp) protein (642aa)
RecF/RecN/SMC N domain protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L080_9FIRM
RecF/RecN/SMC N domain protein {ECO:0000313|EMBL:CCY72505.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L2_022_000M1_scaffold_237_55
unknown

Not on your lists

comp(51798..52232)
DNA (435bp) protein (145aa)

This feature has no annotations

L2_022_000M1_scaffold_237_56
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52512..53228)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CNH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE91255.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
hypothetical protein
L2_022_000M1_scaffold_237_57
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(53221..54666)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L4K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFL56676.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
hypothetical protein
L2_022_000M1_scaffold_237_58
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

comp(54782..55414)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z9M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA33489.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
Predicted phosphoesterase or phosphohydrolase
L2_022_000M1_scaffold_237_59
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55630..56481)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NG07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS82088.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
conserved hypothetical protein TIGR02452
L2_022_000M1_scaffold_237_60
unknown

Not on your lists

comp(56655..56861)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 31-60 of 63 in total

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