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L2_022_000M1_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_237_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..117
DNA (117bp) protein (39aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNX7_9FIRM
RNA polymerase sigma factor, sigma-70 family
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ05131.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_237_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110..799
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAK4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01867.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000M1_scaffold_237_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

977..1363
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SCB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05769.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000M1_scaffold_237_4
unknown

Not on your lists

1461..2444
DNA (984bp) protein (328aa)

This feature has no annotations

L2_022_000M1_scaffold_237_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2698..3246
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R7P0_THETN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25502.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L2_022_000M1_scaffold_237_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3756..4004)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98885.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_022_000M1_scaffold_237_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4097..4600)
DNA (504bp) protein (168aa)
TraG/TraD family protein n=2 Tax=Faecalibacterium prausnitzii RepID=E2ZM55_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EFQ05750.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Type IV secretory pathway, VirD4 components
L2_022_000M1_scaffold_237_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4726..4893)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CLJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58119.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_022_000M1_scaffold_237_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5145..6476)
DNA (1332bp) protein (444aa)
Virulence-associated protein E n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD5_9CLOT
Virulence-associated protein E {ECO:0000313|EMBL:EEA82070.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted P-loop ATPase and inactivated derivatives
L2_022_000M1_scaffold_237_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6433..7059)
DNA (627bp) protein (209aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD6_9CLOT
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEA82071.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA primase (bacterial type)
L2_022_000M1_scaffold_237_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7126..8712)
DNA (1587bp) protein (529aa)
MobA/MobL family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD7_9CLOT
MobA/MobL family protein {ECO:0000313|EMBL:EEA82072.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
plasmid mobilization system relaxase
L2_022_000M1_scaffold_237_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8999..9304)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82074.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_237_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9391..9948)
DNA (558bp) protein (186aa)
HD domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE0_9CLOT
HD domain protein {ECO:0000313|EMBL:EEA82075.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_237_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9967..10584)
DNA (618bp) protein (206aa)
Putative uracil phosphoribosyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE1_9CLOT
Putative uracil phosphoribosyltransferase {ECO:0000313|EMBL:EEA82076.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
uracil phosphoribosyltransferase
L2_022_000M1_scaffold_237_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10785..11075)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82077.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_237_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11053..11349)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82078.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_237_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11459..11731)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82079.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_237_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11749..12096)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82080.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_000M1_scaffold_237_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12099..13973)
DNA (1875bp) protein (625aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71653.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_022_000M1_scaffold_237_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13970..15031)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21266.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Type IV secretory pathway, VirD4 components
L2_022_000M1_scaffold_237_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15028..15486)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7Z6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00959.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000M1_scaffold_237_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15517..15966)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4N2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98475.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_022_000M1_scaffold_237_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16090..16506)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01162.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000M1_scaffold_237_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16575..17000)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7Z4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00957.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000M1_scaffold_237_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17064..17990)
DNA (927bp) protein (309aa)
ParB-like partition proteins n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7Z3_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBL00956.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000M1_scaffold_237_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17947..18783)
DNA (837bp) protein (279aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3H0_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEU97535.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPases involved in chromosome partitioning
L2_022_000M1_scaffold_237_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18780..19649)
DNA (870bp) protein (290aa)
Replication initiator protein A domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMX5_9FIRM
Replication initiator protein A domain protein {ECO:0000313|EMBL:EFQ05431.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Replication initiator protein A (RepA) N-terminus.
L2_022_000M1_scaffold_237_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20112..20603
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05576.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000M1_scaffold_237_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20696..21532)
DNA (837bp) protein (279aa)
8-oxoguanine DNA-glycosylase (Ogg) {ECO:0000313|EMBL:EFQ05575.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFQ05575.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.- 4.2.99.18)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMI4_9FIRM
L2_022_000M1_scaffold_237_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21532..22077)
DNA (546bp) protein (182aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phosphodiesterase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMI3_9FIRM
phosphoesterase, MJ0936 family
Displaying items 1-30 of 63 in total

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