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L2_022_031G1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_031G1_scaffold_34_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(126..578)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
D-tyrosyl-tRNA deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Erysipelotrichaceae RepID=B0N101_9FIRM
L2_022_031G1_scaffold_34_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

655..1920
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=H1APW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45098.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
recombination factor protein RarA
L2_022_031G1_scaffold_34_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2134..3441
DNA (1308bp) protein (436aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Phosphomethylpyrimidine synthase n=3 Tax=Erysipelotrichaceae RepID=B0N103_9FIRM
thiamine biosynthesis protein ThiC
L2_022_031G1_scaffold_34_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3468..4196)
DNA (729bp) protein (243aa)
DNA-binding helix-turn-helix protein n=3 Tax=Erysipelotrichaceae RepID=B0N104_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45100.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_031G1_scaffold_34_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4308..5219)
DNA (912bp) protein (304aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
tRNA dimethylallyltransferase n=2 Tax=Coprobacillus RepID=H1APW9_9FIRM
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
L2_022_031G1_scaffold_34_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5219..7060)
DNA (1842bp) protein (614aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N106_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA mismatch repair protein MutL
L2_022_031G1_scaffold_34_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7061..9571)
DNA (2511bp) protein (837aa)
DNA mismatch repair protein MutS n=3 Tax=Coprobacillus RepID=C3RNB1_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mutS; DNA mismatch repair protein MutS
L2_022_031G1_scaffold_34_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9647..10141)
DNA (495bp) protein (165aa)
Spore coat protein E n=5 Tax=Erysipelotrichaceae RepID=B0N108_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32226.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cotE; Outer spore coat protein
L2_022_031G1_scaffold_34_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10211..11725)
DNA (1515bp) protein (505aa)
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Coprobacillus RepID=G9QZQ4_9FIRM
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CCZ32225.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
inosine 5-monophosphate dehydrogenase
L2_022_031G1_scaffold_34_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11801..12139)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N110_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19926.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_031G1_scaffold_34_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12120..13565)
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=4 Tax=Erysipelotrichaceae RepID=B0N111_9FIRM
(dimethylallyl)adenosine tRNA methylthiotransferase
L2_022_031G1_scaffold_34_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13692..13937)
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N112_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32222.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_031G1_scaffold_34_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14050..14310)
DNA (261bp) protein (87aa)
Stage V sporulation protein S (SpoVS) n=5 Tax=Erysipelotrichaceae RepID=B0N113_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92699.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
stage V sporulation protein S
L2_022_031G1_scaffold_34_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14356..15129)
DNA (774bp) protein (258aa)
Metallophosphoesterase n=5 Tax=Erysipelotrichaceae RepID=C3RNA4_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:EHQ45110.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ymdB; putative metallophosphatase
L2_022_031G1_scaffold_34_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15171..16727)
DNA (1557bp) protein (519aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Ribonuclease Y n=5 Tax=Erysipelotrichaceae RepID=B0N115_9FIRM
2',3'-cyclic-nucleotide 2'-phosphodiesterase
L2_022_031G1_scaffold_34_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16994..19198
DNA (2205bp) protein (735aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA topoisomerase n=2 Tax=Erysipelotrichaceae RepID=B0N116_9FIRM
DNA topoisomerase III
L2_022_031G1_scaffold_34_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(19297..20334)
DNA (1038bp) protein (346aa)
Protein RecA n=5 Tax=Erysipelotrichaceae RepID=B0N0K4_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
recA; recombinase A
L2_022_031G1_scaffold_34_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20373..20831)
DNA (459bp) protein (153aa)
Competence/damage-inducible domain protein CinA n=5 Tax=Erysipelotrichaceae RepID=B0N0K5_9FIRM
Competence/damage-inducible protein CinA domain {ECO:0000313|EMBL:EHQ45114.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cinA; Putative competence-damage inducible protein
L2_022_031G1_scaffold_34_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20831..21424)
DNA (594bp) protein (198aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N0K6_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCZ32215.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L2_022_031G1_scaffold_34_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21424..22416)
DNA (993bp) protein (331aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N0K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32214.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_031G1_scaffold_34_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22799..23944)
DNA (1146bp) protein (382aa)
Lactaldehyde reductase n=5 Tax=Erysipelotrichaceae RepID=B0N0K8_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:EHQ45117.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L-1,2-propanediol oxidoreductase
L2_022_031G1_scaffold_34_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24085..24639)
DNA (555bp) protein (185aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RN96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92688.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional regulator
L2_022_031G1_scaffold_34_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25583..26020
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=4 Tax=Erysipelotrichaceae RepID=B0N0I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31902.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_031G1_scaffold_34_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26020..27087
DNA (1068bp) protein (356aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RN94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92686.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_031G1_scaffold_34_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27263..27526)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92685.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_031G1_scaffold_34_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27538..27945)
DNA (408bp) protein (136aa)
DNA-binding helix-turn-helix protein n=4 Tax=Erysipelotrichaceae RepID=B0N0I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31905.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator
L2_022_031G1_scaffold_34_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28088..28408)
DNA (321bp) protein (107aa)
DivIVA domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N0I6_9FIRM
DivIVA domain-containing protein {ECO:0000313|EMBL:EHQ45123.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell division protein GpsB
L2_022_031G1_scaffold_34_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28615..29214
DNA (600bp) protein (200aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Holliday junction resolvase RecU n=5 Tax=Erysipelotrichaceae RepID=B0N0I7_9FIRM
recU; Holliday junction-specific endonuclease
L2_022_031G1_scaffold_34_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29204..31864
DNA (2661bp) protein (887aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9QZN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92681.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
penicillin-binding protein, 1A
L2_022_031G1_scaffold_34_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31927..32568)
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Endonuclease III n=2 Tax=Coprobacillus RepID=G9QZN1_9FIRM
endonuclease III
Displaying items 1-30 of 120 in total

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