ggKbase home page

L2_022_060G1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_60_1
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(128..391)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSG4_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
30S ribosomal protein S20
L2_022_060G1_scaffold_60_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

695..1705
DNA (1011bp) protein (337aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
spore protease (EC:3.4.24.78)
Germination protease n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB1_9FIRM
L2_022_060G1_scaffold_60_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1910..3190
DNA (1281bp) protein (427aa)
Stage II sporulation protein P (SpoIIP) n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB3_9FIRM
Stage II sporulation protein P (SpoIIP) {ECO:0000313|EMBL:EEQ60207.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Stage II sporulation P family protein
L2_022_060G1_scaffold_60_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3138..5174
DNA (2037bp) protein (679aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Elongation factor 4 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB4_9FIRM
GTP-binding protein LepA
L2_022_060G1_scaffold_60_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5281..6471
DNA (1191bp) protein (397aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEQ60209.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEQ60209.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB5_9FIRM
oxygen-independent coproporphyrinogen III oxidase
L2_022_060G1_scaffold_60_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6588..7331
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60210.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_022_060G1_scaffold_60_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7622..8188
DNA (567bp) protein (189aa)
Peroxiredoxin {ECO:0000313|EMBL:EEQ60211.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEQ60211.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Peroxiredoxin n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB7_9FIRM
alkyl hydrogen peroxide reductase
L2_022_060G1_scaffold_60_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8175..8858
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60212.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
pyridine nucleotide-disulfide oxidoreductase
L2_022_060G1_scaffold_60_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9104..9673
DNA (570bp) protein (190aa)
Glycerol-3-phosphate responsive antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB9_9FIRM
Glycerol-3-phosphate responsive antiterminator {ECO:0000313|EMBL:EEQ60213.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glycerol-3-phosphate responsive antiterminator (mRNA-binding)
L2_022_060G1_scaffold_60_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9858..11354
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC1_9FIRM
L2_022_060G1_scaffold_60_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11406..12119
DNA (714bp) protein (238aa)
MIP family channel protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC2_9FIRM
MIP family channel protein {ECO:0000313|EMBL:EEQ60216.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
MIP family channel proteins
L2_022_060G1_scaffold_60_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12238..13677
DNA (1440bp) protein (480aa)
FAD dependent oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC3_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEQ60217.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted dehydrogenase
L2_022_060G1_scaffold_60_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13693..14958
DNA (1266bp) protein (422aa)
Thioredoxin reductase (EC:1.5.3.1)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC4_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEQ60218.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_022_060G1_scaffold_60_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14962..15318
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60219.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Uncharacterized protein with conserved CXXC pairs
L2_022_060G1_scaffold_60_15
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15589..15783
DNA (195bp) protein (65aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RYY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS44766.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L2_022_060G1_scaffold_60_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15924..16910
DNA (987bp) protein (329aa)
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:EEQ60221.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEQ60221.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.- 2.7.1.121)
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC7_9FIRM
L2_022_060G1_scaffold_60_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17001..17624
DNA (624bp) protein (208aa)
dihydroxyacetone kinase DhaL subunit (EC:2.7.1.- 2.7.1.121)
Dihydroxyacetone kinase, L subunit n=2 Tax=Clostridium bolteae RepID=R0AMQ1_9CLOT
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:ENZ53470.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L2_022_060G1_scaffold_60_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17703..18083
DNA (381bp) protein (127aa)
dihydroxyacetone kinase DhaM subunit (EC:2.7.1.121)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC8_9FIRM
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:EEQ60222.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_022_060G1_scaffold_60_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18353..18703)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60223.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_022_060G1_scaffold_60_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18700..19206)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60224.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_022_060G1_scaffold_60_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19582..20124
DNA (543bp) protein (181aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQD2_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EEQ60226.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
heptaprenyl diphosphate synthase component I
L2_022_060G1_scaffold_60_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20207..21727
DNA (1521bp) protein (507aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQD3_9FIRM
L2_022_060G1_scaffold_60_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21977..22309
DNA (333bp) protein (111aa)
Cupin domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQD9_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EEQ60233.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cupin domain.
L2_022_060G1_scaffold_60_24
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22417..23040
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000363AE6E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52940.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_022_060G1_scaffold_60_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23035..24309)
DNA (1275bp) protein (425aa)
FAD dependent oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQE0_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEQ60234.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_022_060G1_scaffold_60_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24456..25865)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60235.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Bacillus/Clostridium GerA spore germination protein.
L2_022_060G1_scaffold_60_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26251..26661)
DNA (411bp) protein (137aa)
Putative superoxide reductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQE4_9FIRM
Putative superoxide reductase {ECO:0000313|EMBL:EEQ60238.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
desulfoferrodoxin ferrous iron-binding region
L2_022_060G1_scaffold_60_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26859..27293
DNA (435bp) protein (145aa)
Putative HTH-type transcriptional regulator IscR n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQE5_9FIRM
Putative HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EEQ60239.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator, BadM/Rrf2 family
L2_022_060G1_scaffold_60_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27386..28285
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60240.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_022_060G1_scaffold_60_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28407..29147)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95663.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
Displaying items 1-30 of 139 in total

View Taxonomy