ggKbase home page

L2_022_060G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_72_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(352..1989)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=4 Tax=Bacteria RepID=C8WN44_EGGLE
chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_022_060G1_scaffold_72_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2167..2454)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=4 Tax=Bacteria RepID=C8WN45_EGGLE
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_022_060G1_scaffold_72_3
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2721..3407)
DNA (687bp) protein (229aa)
Response regulator receiver domain-containing protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7U4_9ACTN
LuxR family two component transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KGI73984.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_022_060G1_scaffold_72_4
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3408..4649)
DNA (1242bp) protein (414aa)
Histidine kinase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7U5_9ACTN
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACV56770.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_022_060G1_scaffold_72_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4737..6320)
DNA (1584bp) protein (528aa)
Transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C8WN48_EGGLE
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV56771.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_022_060G1_scaffold_72_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6499..7995
DNA (1497bp) protein (499aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BVP8_CLODI
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:EQI11909.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L2_022_060G1_scaffold_72_7
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8059..9603)
DNA (1545bp) protein (515aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BVN7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI74024.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L2_022_060G1_scaffold_72_8
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9895..11430)
DNA (1536bp) protein (512aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=4 Tax=Bacteria RepID=C8WN51_EGGLE
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EGC88305.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_022_060G1_scaffold_72_9
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11590..12432)
DNA (843bp) protein (281aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|RuleBase:RU003812, ECO:0000256|SAAS:SAAS00094448}; EC=6.3.1.5 {ECO:0000256|RuleBase:RU003812, ECO:0000256|SAAS:SAAS00094492};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
NH(3)-dependent NAD(+) synthetase n=3 Tax=Eggerthella RepID=C8WN52_EGGLE
NAD+ synthetase
L2_022_060G1_scaffold_72_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12631..13281)
DNA (651bp) protein (217aa)
Hydrogenase accessory protein HypB n=4 Tax=Bacteria RepID=C8WN53_EGGLE
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:KGI74021.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hydrogenase nickel incorporation protein HypB
L2_022_060G1_scaffold_72_11
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13284..13655)
DNA (372bp) protein (124aa)
Probable hydrogenase nickel incorporation protein HypA n=4 Tax=Bacteria RepID=C8WN54_EGGLE
hydrogenase nickel incorporation protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_022_060G1_scaffold_72_12
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13812..14642)
DNA (831bp) protein (277aa)
Sec-independent protein translocase protein TatC n=4 Tax=Bacteria RepID=C8WN55_EGGLE
Sec-independent protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_022_060G1_scaffold_72_13
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14646..15383)
DNA (738bp) protein (246aa)
Sec-independent translocation protein mttA/Hcf106 n=3 Tax=Bacteria RepID=C8WN56_EGGLE
sec-independent translocation protein mttA/Hcf106
Twin arginine-targeting protein translocase, TatA/E family {ECO:0000313|EMBL:EGC88367.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_022_060G1_scaffold_72_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15582..15782)
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WN57_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI74017.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_022_060G1_scaffold_72_15
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15786..17141)
DNA (1356bp) protein (452aa)
Amidohydrolase n=4 Tax=Bacteria RepID=C8WN58_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI74016.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
amidohydrolase
L2_022_060G1_scaffold_72_16
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17279..19429)
DNA (2151bp) protein (717aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Superfamily I DNA and RNA helicase-like protein n=3 Tax=Bacteria RepID=C8WN59_EGGLE
superfamily I DNA and RNA helicase-like protein
L2_022_060G1_scaffold_72_17
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19584..20330
DNA (747bp) protein (249aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Demethylmenaquinone methyltransferase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7V8_9ACTN
ubiquinone/menaquinone biosynthesis methyltransferase
L2_022_060G1_scaffold_72_18
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20625..20855
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Eggerthella RepID=C8WN61_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV56784.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_022_060G1_scaffold_72_19
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20843..21148
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WN62_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI74013.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_72_20
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21201..21569)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Eggerthella RepID=C8WN63_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI74012.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_72_21
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21566..21934)
DNA (369bp) protein (123aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile F501 RepID=T4BVG2_CLODI
XRE family transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGC88327.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_022_060G1_scaffold_72_22
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22026..23477)
DNA (1452bp) protein (484aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N937_9BIFI
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EUB31310.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
phage integrase
L2_022_060G1_scaffold_72_23
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23699..24496)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KWK1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KFI84044.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
helix-turn-helix domain-containing protein
L2_022_060G1_scaffold_72_24
unknown

Not on your lists

24733..24948
DNA (216bp) protein (72aa)

This feature has no annotations

L2_022_060G1_scaffold_72_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25132..27858
DNA (2727bp) protein (909aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_2004 RepID=L7VY48_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EZX23452.1}; TaxID=1413510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus C0673.;"
hypothetical protein
L2_022_060G1_scaffold_72_26
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28127..28540
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00037C1370
Uncharacterized protein {ECO:0000313|EMBL:EHF02193.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
L2_022_060G1_scaffold_72_27
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28584..28775)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0ITX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78361.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
L2_022_060G1_scaffold_72_28
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28918..29340
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034749CF
Uncharacterized protein {ECO:0000313|EMBL:EHF02192.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
L2_022_060G1_scaffold_72_29
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29333..30610
DNA (1278bp) protein (426aa)
Phage terminase large subunit n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F3F3_9ACTN
Phage terminase large subunit {ECO:0000313|EMBL:EHF02191.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
phage terminase, large subunit, PBSX family
L2_022_060G1_scaffold_72_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30635..30904)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05882.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Displaying items 1-30 of 125 in total

View Taxonomy