ggKbase home page

L2_022_060G1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_94_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..242
DNA (240bp) protein (80aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AYI0_9CLOT
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ENZ37844.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_022_060G1_scaffold_94_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

267..857
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AN66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37843.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_022_060G1_scaffold_94_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

903..1514
DNA (612bp) protein (204aa)
Biotin biosynthesis protein BioY n=4 Tax=Clostridium bolteae RepID=R0B0N4_9CLOT
Biotin biosynthesis protein BioY {ECO:0000313|EMBL:ENZ37842.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_022_060G1_scaffold_94_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1521..2546)
DNA (1026bp) protein (342aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.- 4.2.99.18)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZDA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37841.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_022_060G1_scaffold_94_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3089..4108
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Phenylalanine--tRNA ligase alpha subunit n=4 Tax=Clostridium bolteae RepID=A8RMS4_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
L2_022_060G1_scaffold_94_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4157..6589
DNA (2433bp) protein (811aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium bolteae 90B8 RepID=R0AYH8_9CLOT
phenylalanyl-tRNA synthetase subunit beta
L2_022_060G1_scaffold_94_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6782..10759
DNA (3978bp) protein (1326aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RMS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17764.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
diguanylate cyclase (GGDEF) domain
L2_022_060G1_scaffold_94_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11104..11841
DNA (738bp) protein (246aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RMR9_9CLOT
FeS assembly ATPase SufC {ECO:0000313|EMBL:ENZ14776.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
L2_022_060G1_scaffold_94_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11859..12779
DNA (921bp) protein (307aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RMR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17761.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L2_022_060G1_scaffold_94_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12898..14193
DNA (1296bp) protein (432aa)
Na+:H+ antiporter n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZDB7_9CLOT
Na+:H+ antiporter {ECO:0000313|EMBL:ENZ37835.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
putative methionine transporter, NhaC family (TC 2.A.35.1.-)
L2_022_060G1_scaffold_94_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14190..15518
DNA (1329bp) protein (443aa)
Transporter n=4 Tax=Clostridium bolteae RepID=A8RMR6_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Na+-dependent transporters of the SNF family
L2_022_060G1_scaffold_94_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15552..17327
DNA (1776bp) protein (592aa)
Peptidase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AN59_9CLOT
Peptidase {ECO:0000313|EMBL:ENZ37833.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L2_022_060G1_scaffold_94_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17459..18469
DNA (1011bp) protein (337aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RMR4_9CLOT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
deoxyguanosinetriphosphate triphosphohydrolase
L2_022_060G1_scaffold_94_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18526..20352
DNA (1827bp) protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
DNA primase n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZD91_9CLOT
DNA primase
L2_022_060G1_scaffold_94_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20383..21507
DNA (1125bp) protein (375aa)
RNA polymerase sigma factor SigA n=9 Tax=Clostridium RepID=A8RMR2_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_022_060G1_scaffold_94_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21500..22285
DNA (786bp) protein (262aa)
tRNA (Adenine22-N1)-methyltransferase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AYH3_9CLOT
tRNA (Adenine22-N1)-methyltransferase {ECO:0000313|EMBL:ENZ37829.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Predicted SAM-dependent methyltransferase
L2_022_060G1_scaffold_94_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22272..23081
DNA (810bp) protein (270aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium bolteae 90B8 RepID=R0AN55_9CLOT
conserved hypothetical protein TIGR00486
L2_022_060G1_scaffold_94_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23122..24774
DNA (1653bp) protein (551aa)
Uridine kinase n=1 Tax=Clostridium bolteae 90B8 RepID=R0B0M1_9CLOT
Uridine kinase {ECO:0000313|EMBL:ENZ37827.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
AAA ATPase
L2_022_060G1_scaffold_94_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25024..26052
DNA (1029bp) protein (343aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RMQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17751.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
TRAP dicarboxylate transporter subunit DctP
L2_022_060G1_scaffold_94_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26078..26569
DNA (492bp) protein (164aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RMQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17750.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
TRAP-type C4-dicarboxylate transport system, small permease component
L2_022_060G1_scaffold_94_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26573..27862
DNA (1290bp) protein (430aa)
TRAP transporter, DctM subunit n=1 Tax=Clostridium bolteae 90B8 RepID=R0AYG9_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ37824.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
TRAP dicarboxylate transporter subunit DctM
L2_022_060G1_scaffold_94_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28016..29008
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RMQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17747.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC-type sugar transport system, periplasmic component
L2_022_060G1_scaffold_94_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28998..30860
DNA (1863bp) protein (621aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B0L6_9CLOT
histidine kinase internal region
L2_022_060G1_scaffold_94_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30841..32349
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZD82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37821.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
two component transcriptional regulator, AraC family
L2_022_060G1_scaffold_94_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33029..33406
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZDA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37820.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_022_060G1_scaffold_94_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33614..34657
DNA (1044bp) protein (348aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RMP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17741.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_022_060G1_scaffold_94_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34731..36146)
DNA (1416bp) protein (472aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=4 Tax=Clostridium bolteae RepID=A8RMP7_9CLOT
L2_022_060G1_scaffold_94_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36169..37170)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RMP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17739.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
LacI family transcriptional regulator
L2_022_060G1_scaffold_94_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37377..38864
DNA (1488bp) protein (496aa)
altronate dehydratase (EC:4.2.1.7)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RMP5_9CLOT
Altronate hydrolase {ECO:0000313|EMBL:ENZ37816.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_022_060G1_scaffold_94_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39013..39774
DNA (762bp) protein (254aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RMP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17737.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
IclR family transcriptional regulator
Displaying items 1-30 of 100 in total

View Taxonomy