ggKbase home page

L2_022_060G1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_108_1
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..799
DNA (798bp) protein (266aa)
Uncharacterized protein (Fragment) n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LD61_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS56719.1}; Flags: Fragment;; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
chemotaxis protein CheY
L2_022_060G1_scaffold_108_2
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

829..2913
DNA (2085bp) protein (695aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Two-component system, chemotaxis family, sensor kinase CheA n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDS6_9BACL
chemotaxis protein CheA
L2_022_060G1_scaffold_108_3
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2943..3404
DNA (462bp) protein (154aa)
Purine-binding chemotaxis protein CheW n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LLU2_9BACL
CheW-like domain protein {ECO:0000313|EMBL:KFN09061.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
CheW domain-containing protein
L2_022_060G1_scaffold_108_4
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3408..4034
DNA (627bp) protein (209aa)
chemotaxis protein CheY n=1 Tax=Paenibacillus fonticola RepID=UPI000378EB09
CheY-P phosphatase CheC {ECO:0000313|EMBL:KFN09099.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
CheC, inhibitor of MCP methylation
L2_022_060G1_scaffold_108_5
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4027..4524
DNA (498bp) protein (166aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDC0_9BACL
chemotaxis protein CheD
L2_022_060G1_scaffold_108_6
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4527..4949
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI0003655BED
Uncharacterized protein {ECO:0000313|EMBL:KFN09085.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
L2_022_060G1_scaffold_108_7
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4965..5753
DNA (789bp) protein (263aa)
RNA polymerase sigma factor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVY5_9BACL
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
fliA; RNA polymerase sigma factor
L2_022_060G1_scaffold_108_8
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5801..7210
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVY6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KFN09185.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
polymerase
L2_022_060G1_scaffold_108_9
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7283..7612
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI000362369F
Uncharacterized protein {ECO:0000313|EMBL:KFN09138.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
L2_022_060G1_scaffold_108_10
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7703..8326
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDB4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KFN09158.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
L2_022_060G1_scaffold_108_11
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8323..8928
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVY9_9BACL
YceG-like family protein {ECO:0000313|EMBL:KFN09041.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
L2_022_060G1_scaffold_108_12
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9357..10055
DNA (699bp) protein (233aa)
30S ribosomal protein S2 n=1 Tax=Paenibacillus fonticola RepID=UPI000374C9AE
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
rpsB; 30S ribosomal protein S2
L2_022_060G1_scaffold_108_13
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10404..11054
DNA (651bp) protein (217aa)
Elongation factor Ts n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LLT3_9BACL
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
tsf; elongation factor Ts
L2_022_060G1_scaffold_108_14
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11185..11913
DNA (729bp) protein (243aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LEC0_9BACL
L2_022_060G1_scaffold_108_15
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11913..12467
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVZ3_9BACL
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
frr; ribosome recycling factor (ribosome releasing factor)
L2_022_060G1_scaffold_108_16
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12539..13306
DNA (768bp) protein (256aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
UDP pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVZ4_9BACL
L2_022_060G1_scaffold_108_17
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13326..14123
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDQ6_9BACL
Cytidylyltransferase family protein {ECO:0000313|EMBL:KFN09131.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
phosphatidate cytidylyltransferase
L2_022_060G1_scaffold_108_18
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14769..15908
DNA (1140bp) protein (380aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LMK6_9BACL
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_022_060G1_scaffold_108_19
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16059..17333
DNA (1275bp) protein (425aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
RIP metalloprotease RseP n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LF15_9BACL
membrane-associated zinc metalloprotease
L2_022_060G1_scaffold_108_20
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


17408..18859
DNA (1452bp) protein (484aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase n=1 Tax=Paenibacillus sanguinis RepID=UPI00036127B9
L2_022_060G1_scaffold_108_21
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19132..23448
DNA (4317bp) protein (1439aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
DNA polymerase III polC-type n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVZ9_9BACL
DNA polymerase iii, alpha subunit
L2_022_060G1_scaffold_108_22
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23940..24401
DNA (462bp) protein (154aa)
Ribosome maturation factor RimP n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LEI0_9BACL
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
ribosome maturation factor rimp
L2_022_060G1_scaffold_108_23
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24470..25561
DNA (1092bp) protein (364aa)
Transcription termination factor NusA n=2 Tax=Paenibacillus RepID=C6IW01_9BACL
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
nusA; transcription elongation factor NusA
L2_022_060G1_scaffold_108_24
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25579..25893
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LF11_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KFN09104.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
nucleic-acid-binding protein
L2_022_060G1_scaffold_108_25
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25880..26209
DNA (330bp) protein (110aa)
protein RplGA n=1 Tax=Paenibacillus sanguinis RepID=UPI000364C41C
Uncharacterized protein {ECO:0000313|EMBL:KFN09183.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
ribosomal protein ylxQ
L2_022_060G1_scaffold_108_26
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26202..28814
DNA (2613bp) protein (871aa)
Translation initiation factor IF-2 n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDV2_9BACL
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
translation initiation factor IF-2
L2_022_060G1_scaffold_108_27
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28828..29181
DNA (354bp) protein (118aa)
Ribosome-binding factor A n=2 Tax=Paenibacillus RepID=C6IW05_9BACL
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
ribosome-binding factor A
L2_022_060G1_scaffold_108_28
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29457..30431
DNA (975bp) protein (325aa)
DHHA1 domain protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IW06_9BACL
DHH family protein {ECO:0000313|EMBL:KFN09177.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
phosphoesterase recj domain-containing protein
L2_022_060G1_scaffold_108_29
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30428..31345
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
tRNA pseudouridine synthase B n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LF07_9BACL
pseudouridine synthase
L2_022_060G1_scaffold_108_30
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31462..32346
DNA (885bp) protein (295aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Riboflavin biosynthesis protein RibF n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IW08_9BACL
riboflavin biosynthesis protein RibF
Displaying items 1-30 of 93 in total

View Taxonomy