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L2_022_060G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_152_1
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GIA9_9FIRM
plasmid segregation actin-type ATPase ParM
Uncharacterized protein {ECO:0000313|EMBL:CCX98257.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L2_022_060G1_scaffold_152_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(239..418)
DNA (180bp) protein (60aa)
Uncharacterized protein n=6 Tax=root RepID=A5Z9Z5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09831.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_060G1_scaffold_152_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(706..822)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R400_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90616.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Helix-turn-helix.
L2_022_060G1_scaffold_152_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

973..1941
DNA (969bp) protein (323aa)
Peptidase family T4 n=4 Tax=Erysipelotrichaceae RepID=B0N1L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90615.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
peptidase family T4
L2_022_060G1_scaffold_152_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2110..2730
DNA (621bp) protein (207aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45821.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_060G1_scaffold_152_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3004..3597
DNA (594bp) protein (198aa)
Cof-like hydrolase n=3 Tax=Erysipelotrichaceae RepID=B0N1M0_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHM90613.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_060G1_scaffold_152_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3561..3848
DNA (288bp) protein (96aa)
putative HAD-superfamily hydrolase / phosphatase (EC:3.6.1.-)
Cof-like hydrolase n=3 Tax=Erysipelotrichaceae RepID=B0N1M0_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ36803.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_152_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3949..4332)
DNA (384bp) protein (128aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45827.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_060G1_scaffold_152_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4375..5292)
DNA (918bp) protein (306aa)
PTS system, mannose/fructose/sorbose family, IID component n=5 Tax=Erysipelotrichaceae RepID=B0N1N6_9FIRM
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EHQ45828.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
manZ; PTS system mannose/fructose/sorbose family transporter subunit IID
L2_022_060G1_scaffold_152_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5316..6131)
DNA (816bp) protein (272aa)
PTS system sorbose-specific iic component n=5 Tax=Erysipelotrichaceae RepID=B0N1N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90606.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system subunit IIC
L2_022_060G1_scaffold_152_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6157..7146)
DNA (990bp) protein (330aa)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EDS19643.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS19643.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
manX; PTS system mannose/fructose/sorbose transporter subunit IIAB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=5 Tax=Erysipelotrichaceae RepID=B0N1N8_9FIRM
L2_022_060G1_scaffold_152_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7370..8194)
DNA (825bp) protein (275aa)
PRD domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N1N9_9FIRM
PRD domain protein {ECO:0000313|EMBL:EDS19644.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_022_060G1_scaffold_152_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8211..10316)
DNA (2106bp) protein (702aa)
ptsG; putative PTS system glucose-specific EIICBA component (EC:2.7.1.69)
PTS system, glucose-like IIB component n=3 Tax=Erysipelotrichaceae RepID=B0N1P0_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHM90603.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_060G1_scaffold_152_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10576..12294)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=G9R3Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45833.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_060G1_scaffold_152_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12319..13749)
DNA (1431bp) protein (477aa)
gmuD; 6-phospho-beta-glucosidase GmuD (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=4 Tax=Erysipelotrichaceae RepID=B0N1P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36811.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_152_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13751..15037)
DNA (1287bp) protein (429aa)
PTS system, cellobiose-specific IIC subunit (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=2 Tax=Coprobacillus RepID=C3RIT7_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_152_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15152..15871)
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family n=4 Tax=Erysipelotrichaceae RepID=B0N1P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36813.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
GntR family transcriptional regulator
L2_022_060G1_scaffold_152_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16069..16869)
DNA (801bp) protein (267aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Prolipoprotein diacylglyceryl transferase n=4 Tax=Erysipelotrichaceae RepID=B0N1P5_9FIRM
bifunctional prolipoprotein diacylglyceryl transferase/phosphatase protein
L2_022_060G1_scaffold_152_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16873..17811)
DNA (939bp) protein (313aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
HPr kinase/phosphorylase n=5 Tax=Erysipelotrichaceae RepID=B0N1P6_9FIRM
HPr kinase/phosphorylase
L2_022_060G1_scaffold_152_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17822..20644)
DNA (2823bp) protein (941aa)
UvrABC system protein A n=4 Tax=Erysipelotrichaceae RepID=B0N1P7_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
uvrA; excinuclease ABC subunit A
L2_022_060G1_scaffold_152_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20648..22003)
DNA (1356bp) protein (452aa)
cca; multifunctional CCA protein (EC:3.1.4.- 2.7.7.72 3.1.3.-)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N1P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36817.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_152_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21993..23966)
DNA (1974bp) protein (658aa)
UvrABC system protein B n=5 Tax=Erysipelotrichaceae RepID=B0N1P9_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Excinuclease ABC subunit B
L2_022_060G1_scaffold_152_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24061..25518)
DNA (1458bp) protein (486aa)
Peptidase, S41 family n=5 Tax=Erysipelotrichaceae RepID=B0N1Q0_9FIRM
C-terminal processing peptidase {ECO:0000313|EMBL:CCZ36819.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ctpA; carboxy-terminal processing proteinase
L2_022_060G1_scaffold_152_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25888..26667)
DNA (780bp) protein (260aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=4 Tax=Erysipelotrichaceae RepID=B0N1M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90594.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_060G1_scaffold_152_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26731..27696)
DNA (966bp) protein (322aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L-lactate dehydrogenase n=5 Tax=Erysipelotrichaceae RepID=B0N1N0_9FIRM
ldh; L-lactate dehydrogenase
L2_022_060G1_scaffold_152_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28002..28823)
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36822.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_060G1_scaffold_152_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29049..29915
DNA (867bp) protein (289aa)
Cof-like hydrolase n=2 Tax=Coprobacillus RepID=C3RIS6_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHQ45846.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
haloacid dehalogenase-like hydrolase
L2_022_060G1_scaffold_152_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29933..31042)
DNA (1110bp) protein (370aa)
nspC; carboxynorspermidine decarboxylase NspC (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=3 Tax=Coprobacillus RepID=C3RIS5_9FIRM
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CCZ36824.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_152_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31042..32244)
DNA (1203bp) protein (401aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=5 Tax=Erysipelotrichaceae RepID=B0N1R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45848.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_060G1_scaffold_152_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32241..33104)
DNA (864bp) protein (288aa)
speB; agmatinase SpeB (EC:3.5.3.11)
Agmatinase n=4 Tax=Erysipelotrichaceae RepID=B0N1R5_9FIRM
Agmatinase {ECO:0000313|EMBL:EHM90587.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Displaying items 1-30 of 76 in total

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