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L2_022_060G1_scaffold_196

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_196_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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391..744
DNA (354bp) protein (118aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N405_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31771.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

760..1671
DNA (912bp) protein (304aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=5 Tax=Erysipelotrichaceae RepID=B0N404_9FIRM
L2_022_060G1_scaffold_196_3
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1703..3040)
DNA (1338bp) protein (446aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGK9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ47980.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
MATE efflux family protein
L2_022_060G1_scaffold_196_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3182..3799
DNA (618bp) protein (206aa)
Cof-like hydrolase n=5 Tax=Erysipelotrichaceae RepID=C3RLQ7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHQ47979.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
HAD-superfamily hydrolase, subfamily IIB
L2_022_060G1_scaffold_196_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4130..4882)
DNA (753bp) protein (251aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Putative GTP cyclohydrolase 1 type 2 n=5 Tax=Erysipelotrichaceae RepID=B0N400_9FIRM
hypothetical protein
L2_022_060G1_scaffold_196_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4869..5561)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47977.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative SAM-dependent methyltransferase
L2_022_060G1_scaffold_196_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5563..6816)
DNA (1254bp) protein (418aa)
RNA polymerase sigma factor SigA n=5 Tax=Erysipelotrichaceae RepID=B0N3Z8_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
sigA; RNA polymerase sigma factor RpoD
L2_022_060G1_scaffold_196_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6820..8574)
DNA (1755bp) protein (585aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DNA primase n=4 Tax=Erysipelotrichaceae RepID=B0N3Z7_9FIRM
DNA primase
L2_022_060G1_scaffold_196_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(8590..9963)
DNA (1374bp) protein (458aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=2 Tax=Erysipelotrichaceae RepID=B0N3Z6_9FIRM
L2_022_060G1_scaffold_196_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10122..11036)
DNA (915bp) protein (305aa)
Hydrolase, alpha/beta domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91647.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
alpha/beta hydrolase
L2_022_060G1_scaffold_196_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11039..12883)
DNA (1845bp) protein (615aa)
UPF0313 protein BN521_00686 n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RFM9_9FIRM
UPF0313 protein BN521_00686 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
radical SAM domain-containing protein
L2_022_060G1_scaffold_196_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12978..13724)
DNA (747bp) protein (249aa)
DNA repair protein RecO n=4 Tax=Erysipelotrichaceae RepID=B0N3Z3_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
DNA repair protein RecO
L2_022_060G1_scaffold_196_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13714..14604)
DNA (891bp) protein (297aa)
GTPase Era n=4 Tax=Erysipelotrichaceae RepID=B0N3Z2_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
era; GTP-binding protein Era
L2_022_060G1_scaffold_196_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14583..14999)
DNA (417bp) protein (139aa)
Cytidine deaminase {ECO:0000313|EMBL:EDS19163.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EDS19163.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Cytidine deaminase n=4 Tax=Erysipelotrichaceae RepID=B0N3Z1_9FIRM
cytidine deaminase
L2_022_060G1_scaffold_196_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15077..15538)
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Endoribonuclease YbeY n=5 Tax=Erysipelotrichaceae RepID=B0N3Z0_9FIRM
hypothetical protein
L2_022_060G1_scaffold_196_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15552..17594)
DNA (2043bp) protein (681aa)
ABC transporter, ATP-binding protein n=6 Tax=Erysipelotrichaceae RepID=B0N3Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31755.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
bacteriocin ABC transporter ATPase
L2_022_060G1_scaffold_196_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17649..17831)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31754.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18008..18211
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31754.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_060G1_scaffold_196_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18157..18384)
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31754.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18612..19646)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QSZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31753.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19685..21856)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91638.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
conserved repeat protein
L2_022_060G1_scaffold_196_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21834..23039)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31751.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23060..23989)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31751.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
LPXTG-motif cell wall anchor domain-containing protein
L2_022_060G1_scaffold_196_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24460..27813)
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47964.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_060G1_scaffold_196_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27836..29017)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47963.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
SARP family transcriptional regulator
L2_022_060G1_scaffold_196_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29162..30217)
DNA (1056bp) protein (352aa)
Twitching motility protein n=5 Tax=Erysipelotrichaceae RepID=B0N3Y4_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EHQ47962.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L2_022_060G1_scaffold_196_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30219..30599)
DNA (381bp) protein (127aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31748.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30592..30960)
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RLN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31747.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_196_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30970..31419)
DNA (450bp) protein (150aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91633.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_060G1_scaffold_196_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31412..31711)
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19152.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
Displaying items 1-30 of 72 in total

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