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L2_022_060G1_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_225_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

341..775
DNA (435bp) protein (145aa)
DNA repair protein RadC family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W428_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:KJZ92199.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
radC; DNA repair protein RadC
L2_022_060G1_scaffold_225_2
unknown

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862..969
DNA (108bp) protein (36aa)

This feature has no annotations

L2_022_060G1_scaffold_225_3
unknown

Not on your lists

993..1196
DNA (204bp) protein (68aa)

This feature has no annotations

L2_022_060G1_scaffold_225_4
unknown

Not on your lists

1440..1733
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVI4_CLOPF
L2_022_060G1_scaffold_225_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1801..2688
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E15 RepID=U3Y4V0_CLODI
putative DNA modification methylase
Uncharacterized protein {ECO:0000313|EMBL:CCL32167.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_060G1_scaffold_225_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2928..3257
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=7 Tax=Firmicutes RepID=D4JXS8_9FIRM
Bacterial mobilisation protein (MobC).
Uncharacterized protein {ECO:0000313|EMBL:EFB77097.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_022_060G1_scaffold_225_7
Eggerthia catenaformis, Eggerthia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3218..4789
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2Q3A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMD16751.1}; TaxID=999415 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Eggerthia.;" source="Eggerthia catenaformis OT 569 = DSM 20559.;"
hypothetical protein
L2_022_060G1_scaffold_225_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5103..5672
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5US71_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES48718.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_022_060G1_scaffold_225_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5805..6302
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YNI6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJU72394.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_022_060G1_scaffold_225_10
Clostridium haemolyticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6499..7434
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P50 RepID=T4R2N2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGN03869.1}; TaxID=1443115 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium haemolyticum NCTC 8350.;"
L2_022_060G1_scaffold_225_11
unknown

Not on your lists

7447..7761
DNA (315bp) protein (105aa)

This feature has no annotations

L2_022_060G1_scaffold_225_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7794..8690)
DNA (897bp) protein (299aa)
SOS-response transcriptional repressor n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1H8_CLOPF
SOS-response transcriptional repressor {ECO:0000313|EMBL:EDT72312.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
transcription regulator phage-related
L2_022_060G1_scaffold_225_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9036..9497)
DNA (462bp) protein (154aa)
Transcriptional regulator XRE n=1 Tax=Clostridium perfringens RepID=K9MEA8_CLOPF
Transcriptional regulator XRE {ECO:0000313|EMBL:AFV15095.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
transcription regulator phage-related
L2_022_060G1_scaffold_225_14
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9677..10057
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JYL7_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95393.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_022_060G1_scaffold_225_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10167..11009
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81457.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_225_16
unknown

Not on your lists

11098..11280
DNA (183bp) protein (61aa)

This feature has no annotations

L2_022_060G1_scaffold_225_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11451..14207
DNA (2757bp) protein (919aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM69_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEA82848.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Cna protein B-type domain.
L2_022_060G1_scaffold_225_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14227..16077
DNA (1851bp) protein (617aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR77_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEA81456.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Cna protein B-type domain.
L2_022_060G1_scaffold_225_19
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16120..16962
DNA (843bp) protein (281aa)
Sortase family protein n=2 Tax=Lachnospiraceae RepID=C9L6H6_BLAHA
Sortase family protein {ECO:0000313|EMBL:EEX22020.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
LPXTG-site transpeptidase (sortase) family protein
L2_022_060G1_scaffold_225_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16943..17692
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80068.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_225_21
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17680..18414
DNA (735bp) protein (245aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R6NS14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80820.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
sortase, SrtB family
L2_022_060G1_scaffold_225_22
unknown

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18541..18636
DNA (96bp) protein (32aa)

This feature has no annotations

L2_022_060G1_scaffold_225_23
unknown

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18790..19164
DNA (375bp) protein (125aa)

This feature has no annotations

L2_022_060G1_scaffold_225_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19325..19807
DNA (483bp) protein (161aa)
conjugative transposon protein n=1 Tax=Clostridium difficile RepID=UPI0003709D43
Uncharacterized protein {ECO:0000313|EMBL:EDS07620.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_022_060G1_scaffold_225_25
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19807..21561
DNA (1755bp) protein (585aa)
TraG/TraD family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W3D8_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EFF64554.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
Type IV secretory pathway, VirD4 components
L2_022_060G1_scaffold_225_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21578..21781
DNA (204bp) protein (68aa)
permease n=1 Tax=Paenibacillus fonticola RepID=UPI0003787108
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75856.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_060G1_scaffold_225_27
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21813..22646
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003754D66
Anticodon nuclease activator family protein {ECO:0000313|EMBL:EFF64552.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
hypothetical protein
L2_022_060G1_scaffold_225_28
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22990..25512
DNA (2523bp) protein (841aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00035E54C2
Orf26 family protein {ECO:0000313|EMBL:EFF64551.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
hypothetical protein
L2_022_060G1_scaffold_225_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25512..27869
DNA (2358bp) protein (786aa)
Cell wall-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BST2_CLOPF
Cell wall-binding protein {ECO:0000313|EMBL:EDT15184.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
tcpG; putative cell wall associated hydrolase
L2_022_060G1_scaffold_225_30
unknown

Not on your lists

27917..28117
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying items 1-30 of 56 in total

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