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L2_022_060G1_scaffold_284

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_284_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..1310
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FM32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82889.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted N6-adenine-specific DNA methylase
L2_022_060G1_scaffold_284_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1326..1925
DNA (600bp) protein (200aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=Clostridium RepID=B6FM33_9CLOT
L2_022_060G1_scaffold_284_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1922..2401
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGL8_9CLOT
phosphoesterase, MJ0936 family
L2_022_060G1_scaffold_284_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3463..4464)
DNA (1002bp) protein (334aa)
Transcriptional regulators (EC:5.1.1.1)
Transcriptional regulator, LacI family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM36_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEA82893.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_284_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4711..5952
DNA (1242bp) protein (414aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM37_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEA82894.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_022_060G1_scaffold_284_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5968..7344
DNA (1377bp) protein (459aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FM38_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82895.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
maltose/maltodextrin transport system permease
L2_022_060G1_scaffold_284_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7347..8219
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FM39_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82896.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_022_060G1_scaffold_284_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8235..10160
DNA (1926bp) protein (642aa)
Pullulanase, type I {ECO:0000313|EMBL:EEA82897.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EEA82897.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Pullulanase, type I n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM40_9CLOT
pullulanase, type I
L2_022_060G1_scaffold_284_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10165..12108
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YMX5_9FIRM
Putative glycogen debranching enzyme, archaeal type {ECO:0000313|EMBL:EEA82898.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycogen debranching protein
L2_022_060G1_scaffold_284_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12113..14374
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphorylase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PE12_9CLOT
glycogen/starch/alpha-glucan phosphorylase
L2_022_060G1_scaffold_284_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14388..15839
DNA (1452bp) protein (484aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Clostridium RepID=B6FM43_9CLOT
L2_022_060G1_scaffold_284_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15857..17620
DNA (1764bp) protein (588aa)
Alpha amylase, catalytic domain protein n=2 Tax=Clostridium RepID=B6FM44_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82901.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycosidase
L2_022_060G1_scaffold_284_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17622..19250
DNA (1629bp) protein (543aa)
Glycosidases (EC:3.2.1.70)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM45_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82902.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_284_14
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19325..20005
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K9Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43068.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
two-component response regulator
L2_022_060G1_scaffold_284_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20002..20991
DNA (990bp) protein (330aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3U2_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDS74326.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
integral membrane sensor signal transduction histidine kinase
L2_022_060G1_scaffold_284_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21093..21851
DNA (759bp) protein (253aa)
polyamine-transporting ATPase (EC:3.6.3.31)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3U3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74327.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_022_060G1_scaffold_284_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21848..23746
DNA (1899bp) protein (633aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3U4_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDS74328.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC transporter permease
L2_022_060G1_scaffold_284_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23826..25184
DNA (1359bp) protein (453aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM47_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEA82904.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_284_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25217..25642
DNA (426bp) protein (142aa)
Hemerythrin HHE cation binding domain protein n=2 Tax=Clostridium RepID=B6FM48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22551.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hemerythrin-like metal-binding domain
L2_022_060G1_scaffold_284_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26531..27454
DNA (924bp) protein (308aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Clostridium RepID=B6FM49_9CLOT
L2_022_060G1_scaffold_284_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27427..27735
DNA (309bp) protein (103aa)
Acyl carrier protein n=2 Tax=Clostridium RepID=B6FM50_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acyl carrier protein
L2_022_060G1_scaffold_284_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27751..28689
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PE06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22548.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_284_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28682..29614
DNA (933bp) protein (311aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Clostridium RepID=B6FM52_9CLOT
L2_022_060G1_scaffold_284_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29596..30336
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22546.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_284_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30354..31592
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Clostridium RepID=B6FM54_9CLOT
L2_022_060G1_scaffold_284_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31558..32022
DNA (465bp) protein (155aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM55_9CLOT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EEA82912.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L2_022_060G1_scaffold_284_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32045..32473
DNA (429bp) protein (143aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=2 Tax=Clostridium RepID=B6FM56_9CLOT
L2_022_060G1_scaffold_284_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32482..33822
DNA (1341bp) protein (447aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Clostridium RepID=B6FM57_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22542.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_284_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33868..35541
DNA (1674bp) protein (558aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase carboxyl transferase beta subunit n=2 Tax=Clostridium RepID=R6PVQ0_9CLOT
L2_022_060G1_scaffold_284_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35561..36622
DNA (1062bp) protein (354aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM60_9CLOT
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EEA82917.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Dioxygenases related to 2-nitropropane dioxygenase
Displaying items 1-30 of 36 in total

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