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L2_022_060G1_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_286_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17..1387
DNA (1371bp) protein (457aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0Y3_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL13273.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_060G1_scaffold_286_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1450..2439
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X0Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08976.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Abi-like protein.
L2_022_060G1_scaffold_286_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2596..2802)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0Y0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13270.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_060G1_scaffold_286_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2807..6862)
DNA (4056bp) protein (1352aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YAM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08978.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Domain of unknown function (DUF955).
L2_022_060G1_scaffold_286_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7008..15524)
DNA (8517bp) protein (2839aa)
Uncharacterized protein n=2 Tax=root RepID=N9YAN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08993.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
putative adenine-specific DNA methylase
L2_022_060G1_scaffold_286_6
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15748..15906)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ARS9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57275.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_022_060G1_scaffold_286_7
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16050..16859)
DNA (810bp) protein (270aa)
Putative DNA-damage-inducible protein D n=1 Tax=Roseburia sp. CAG:182 RepID=R7QY97_9FIRM
Putative DNA-damage-inducible protein D {ECO:0000313|EMBL:CDF43204.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
putative transcriptional regulator
L2_022_060G1_scaffold_286_8
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17052..17291)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68101.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L2_022_060G1_scaffold_286_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17378..19489)
DNA (2112bp) protein (704aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
DNA topoisomerase n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X106_9CLOT
DNA topoisomerase III
L2_022_060G1_scaffold_286_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19492..21249)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YMG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08997.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_022_060G1_scaffold_286_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21224..21487)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98672.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_022_060G1_scaffold_286_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21506..24109)
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YL43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08999.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Membrane proteins related to metalloendopeptidases
L2_022_060G1_scaffold_286_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24111..26582)
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X1F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09000.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_022_060G1_scaffold_286_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26521..26937)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X112_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09001.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_022_060G1_scaffold_286_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26950..27822)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YMG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09002.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_022_060G1_scaffold_286_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27981..29684)
DNA (1704bp) protein (568aa)
Site-specific recombinases, DNA invertase Pin homologs n=4 Tax=Firmicutes RepID=D4L227_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL24726.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_022_060G1_scaffold_286_17
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29711..29893)
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=S5V4H3_ENTFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS74668.1}; TaxID=1305849 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Aus0085.;"
L2_022_060G1_scaffold_286_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30098..31978)
DNA (1881bp) protein (627aa)
KaiC n=4 Tax=Firmicutes RepID=D4L225_9FIRM
KaiC.
KaiC {ECO:0000313|EMBL:CBL13665.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_060G1_scaffold_286_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32011..33645)
DNA (1635bp) protein (545aa)
MobA/MobL family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVH7_9FIRM
MobA/MobL family.
MobA/MobL family {ECO:0000313|EMBL:CBL13664.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_060G1_scaffold_286_20
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33645..34010)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WUX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70842.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_286_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34202..34444)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WUX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70841.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_286_22
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34432..34998)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium Aus0085 RepID=S5VUK9_ENTFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS74662.1}; TaxID=1305849 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Aus0085.;"
L2_022_060G1_scaffold_286_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34991..35215)
DNA (225bp) protein (75aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=B7C9C1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEC90698.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_022_060G1_scaffold_286_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35265..35471)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LS60_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23618.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_022_060G1_scaffold_286_25
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35529..35861)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Blautia RepID=C9LBX9_BLAHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEX20399.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L2_022_060G1_scaffold_286_26
unknown

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comp(35930..36139)
DNA (210bp) protein (70aa)

This feature has no annotations

L2_022_060G1_scaffold_286_27
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36411..39191)
DNA (2781bp) protein (927aa)
Uncharacterized protein n=1 Tax=Facklamia hominis CCUG 36813 RepID=K1LEN3_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EKB55090.1}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
hypothetical protein
L2_022_060G1_scaffold_286_28
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39207..39413)
DNA (207bp) protein (69aa)
Predicted transcriptional regulator n=2 Tax=Lachnospiraceae RepID=D4JB98_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK81619.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_022_060G1_scaffold_286_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39568..39978)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein n=4 Tax=Firmicutes RepID=D4L214_9FIRM
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_060G1_scaffold_286_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40002..40301)
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=B7C9D2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24712.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Displaying items 1-30 of 36 in total

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