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L2_022_060G1_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_287_1
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(159..1262)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R019_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43026.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
transposase IS4 family protein
L2_022_060G1_scaffold_287_2

Not on your lists

comp(1566..1787)
DNA (222bp) protein (74aa)
ArsC family protein n=1 Tax=human gut metagenome RepID=K1SRC1_9ZZZZ
ArsC family protein {ECO:0000313|EMBL:EKC57964.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Arsenate reductase and related proteins, glutaredoxin family
L2_022_060G1_scaffold_287_3
unknown

Not on your lists

comp(1753..1890)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_022_060G1_scaffold_287_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2154..2441)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWH7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96261.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_022_060G1_scaffold_287_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2404..2679)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWH7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96261.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_022_060G1_scaffold_287_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2756..4051)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE13815.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Domain of unknown function DUF87.
L2_022_060G1_scaffold_287_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4071..4496)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVY8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21791.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_022_060G1_scaffold_287_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4790..4909)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81540.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_287_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5378..6916)
DNA (1539bp) protein (513aa)
Asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJE7_9CLOT
Asparagine synthetase {ECO:0000313|EMBL:CDC22047.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_287_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7032..8351)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81538.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
membrane protein
L2_022_060G1_scaffold_287_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8324..10003)
DNA (1680bp) protein (560aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FR29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22045.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATPase component of various ABC-type transport systems
L2_022_060G1_scaffold_287_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9976..10911)
DNA (936bp) protein (312aa)
Cobalt transport protein n=2 Tax=Clostridium RepID=B6FR28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22044.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cbiQ4; cobalt ABC transport system permease protein CbiQ4
L2_022_060G1_scaffold_287_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10856..11698)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22043.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_287_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11682..14345)
DNA (2664bp) protein (888aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22042.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_287_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14348..17845)
DNA (3498bp) protein (1166aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PU98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22041.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_287_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18309..19055)
DNA (747bp) protein (249aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=2 Tax=Clostridium RepID=B6FR24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22039.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_287_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19121..19903)
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FR23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22038.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_287_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19900..20886)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22037.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type Fe3+-siderophore transport system, permease component
L2_022_060G1_scaffold_287_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20883..21773)
DNA (891bp) protein (297aa)
Heme ABC transporter, heme-binding protein isdE n=2 Tax=Clostridium RepID=B6FR21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22035.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
heme ABC transporter, heme-binding protein isdE
L2_022_060G1_scaffold_287_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21777..22496)
DNA (720bp) protein (240aa)
Iron transport-associated domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR20_9CLOT
Iron transport-associated domain protein {ECO:0000313|EMBL:EEA81528.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_287_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22498..24147)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PU88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22031.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
beta-N-acetylglucosaminidase
L2_022_060G1_scaffold_287_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24370..25140)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22030.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
manganese transport regulator MntR
L2_022_060G1_scaffold_287_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25145..25540)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22028.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_287_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25631..26212)
DNA (582bp) protein (194aa)
Peptidase propeptide and YPEB domain protein n=2 Tax=Clostridium RepID=B6FR16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22027.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_287_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26323..27687)
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Heavy metal sensor kinase n=2 Tax=Clostridium RepID=B6FR15_9CLOT
Sensor protein basS/pmrB
L2_022_060G1_scaffold_287_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27684..27809)
DNA (126bp) protein (42aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FR14_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA81522.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
OmpR family two-component response regulator
L2_022_060G1_scaffold_287_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27837..28358)
DNA (522bp) protein (174aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FR14_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA81522.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA-binding response regulator
L2_022_060G1_scaffold_287_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28385..29218)
DNA (834bp) protein (278aa)
PRD domain protein n=2 Tax=Clostridium RepID=B6FR13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22021.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional antiterminator, BglG
L2_022_060G1_scaffold_287_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29327..31465)
DNA (2139bp) protein (713aa)
PTS system, glucose-like IIB component n=2 Tax=Clostridium RepID=B6FR12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22019.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L2_022_060G1_scaffold_287_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31832..33256
DNA (1425bp) protein (475aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEA81519.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEA81519.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phospholipase D domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR11_9CLOT
hypothetical protein
Displaying items 1-30 of 35 in total

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