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L2_022_060G1_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_329_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137..649)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84020.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_329_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(662..1594)
DNA (933bp) protein (311aa)
Radical SAM protein, TIGR01212 family n=2 Tax=Clostridium RepID=B6FIZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22428.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
radical SAM protein, TIGR01212 family
L2_022_060G1_scaffold_329_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1594..2742)
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ1_9CLOT
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EEA84018.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_329_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2944..4269
DNA (1326bp) protein (442aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcription termination factor Rho n=2 Tax=Clostridium RepID=B6FIZ0_9CLOT
transcription termination factor Rho
L2_022_060G1_scaffold_329_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4419..4622
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=2 Tax=Clostridium RepID=B6FIY9_9CLOT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RpmE; 50S ribosomal protein L31
L2_022_060G1_scaffold_329_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4724..5626
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84015.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted metal-dependent enzyme
L2_022_060G1_scaffold_329_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5623..6486
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Release factor glutamine methyltransferase n=2 Tax=Clostridium RepID=B6FIY7_9CLOT
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_022_060G1_scaffold_329_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6542..7612
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKD4_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
bacterial peptide chain release factor 1 (bRF-1)
L2_022_060G1_scaffold_329_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7779..9515
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA84012.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_060G1_scaffold_329_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9619..10524
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22420.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_329_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10539..11726
DNA (1188bp) protein (396aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22419.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_329_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11742..12818
DNA (1077bp) protein (359aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDM4_9CLOT
L2_022_060G1_scaffold_329_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12812..13660
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84008.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L2_022_060G1_scaffold_329_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13662..14345
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84007.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA alkylation repair protein
L2_022_060G1_scaffold_329_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14368..15201
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIX9_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA84006.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC-type DNA-binding domain-containing proteins
L2_022_060G1_scaffold_329_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15338..15955
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22407.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_329_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15974..17458
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22406.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L-fucose isomerase and related proteins
L2_022_060G1_scaffold_329_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17558..19030
DNA (1473bp) protein (491aa)
Xylulokinase {ECO:0000313|EMBL:EEA84003.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EEA84003.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIX6_9CLOT
L2_022_060G1_scaffold_329_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19079..19960)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22404.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L2_022_060G1_scaffold_329_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20095..20199
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22403.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_329_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20192..21550
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22402.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
xylose transporter
L2_022_060G1_scaffold_329_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21562..22737
DNA (1176bp) protein (392aa)
beta-glucosidase (EC:3.2.1.58)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84000.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_329_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22758..24404
DNA (1647bp) protein (549aa)
glycoside hydrolase (EC:3.2.1.-)
Glycosyl hydrolase family 43 n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFN6_9CLOT
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDC22400.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_329_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24427..24786)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium RepID=B6FIX0_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA83997.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
helix-turn-helix domain-containing protein
L2_022_060G1_scaffold_329_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24954..25433
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83996.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_329_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25543..26598
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Clostridium RepID=R6QKA5_9CLOT
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_022_060G1_scaffold_329_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26614..31089
DNA (4476bp) protein (1492aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA polymerase III polC-type n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV65_9CLOT
DNA polymerase III subunit alpha
L2_022_060G1_scaffold_329_28
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31290..32003
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JYH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39239.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Response regulator of the LytR/AlgR family
L2_022_060G1_scaffold_329_29
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32004..33275
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AQ11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ28205.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_022_060G1_scaffold_329_30
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33439..33840
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52552.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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