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L2_022_060G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_355_1
unknown

Not on your lists

comp(347..913)
DNA (567bp) protein (189aa)

This feature has no annotations

L2_022_060G1_scaffold_355_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1098..1904)
DNA (807bp) protein (269aa)
Cof-like hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQV5_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEA81560.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
HAD-superfamily hydrolase, subfamily IIB
L2_022_060G1_scaffold_355_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1932..3311)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Clostridium RepID=B6FQV6_9CLOT
L2_022_060G1_scaffold_355_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3327..4382)
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Clostridium RepID=B6FQV7_9CLOT
L2_022_060G1_scaffold_355_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4408..5862)
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQ15_9CLOT
L2_022_060G1_scaffold_355_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6017..6754)
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEW7_9CLOT
L2_022_060G1_scaffold_355_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6933..7346
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22886.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_355_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7359..8918
DNA (1560bp) protein (520aa)
LysM domain protein n=2 Tax=Clostridium RepID=B6FQW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22885.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LysM domain.
L2_022_060G1_scaffold_355_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8994..9872
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Clostridium RepID=B6FQW3_9CLOT
L2_022_060G1_scaffold_355_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9877..10551
DNA (675bp) protein (225aa)
FCD domain protein n=2 Tax=Clostridium RepID=B6FQW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22883.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator, GntR family
L2_022_060G1_scaffold_355_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10616..11251
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QLN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22882.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
stage II sporulation protein R
L2_022_060G1_scaffold_355_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11279..12460
DNA (1182bp) protein (394aa)
Cation diffusion facilitator family transporter n=2 Tax=Clostridium RepID=B6FQW6_9CLOT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEA81571.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cation diffusion facilitator family transporter
L2_022_060G1_scaffold_355_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12461..13174
DNA (714bp) protein (238aa)
Acyl-ACP thioesterase (EC:3.1.2.14)
Acyl-ACP thioesterase n=2 Tax=Clostridium RepID=B6FQW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22880.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_060G1_scaffold_355_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13175..14005
DNA (831bp) protein (277aa)
S1 RNA binding domain protein n=2 Tax=Clostridium RepID=B6FQW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22879.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_355_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14050..14286
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1B8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17926.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_022_060G1_scaffold_355_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14329..15189)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QLN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22877.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_355_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15312..18644)
DNA (3333bp) protein (1111aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQX2_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA81577.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_355_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18671..19414)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22875.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
PpiC-type peptidyl-prolyl cis-trans isomerase
L2_022_060G1_scaffold_355_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19672..23142
DNA (3471bp) protein (1157aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=2 Tax=Clostridium RepID=B6FQX4_9CLOT
L2_022_060G1_scaffold_355_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23215..24189
DNA (975bp) protein (325aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Clostridium RepID=B6FQX5_9CLOT
L2_022_060G1_scaffold_355_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24470..25297
DNA (828bp) protein (276aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=2 Tax=Clostridium RepID=B6FQX6_9CLOT
L2_022_060G1_scaffold_355_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25306..25779
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22871.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_060G1_scaffold_355_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25811..26251)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81583.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_355_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26544..27587
DNA (1044bp) protein (348aa)
Trigger factor n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQX9_9CLOT
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
trigger factor
L2_022_060G1_scaffold_355_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27625..28686)
DNA (1062bp) protein (354aa)
AraC family transcriptional regulator n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEU3_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:CDC22868.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator AraC family
L2_022_060G1_scaffold_355_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28871..30241
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QLM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22867.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
major facilitator superfamily protein
L2_022_060G1_scaffold_355_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30244..31506
DNA (1263bp) protein (421aa)
Disaccharride transporter major facilitator super family (MFS) n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWL5_9CLOT
Disaccharride transporter major facilitator super family (MFS) {ECO:0000313|EMBL:CDC22866.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sugar transport protein
L2_022_060G1_scaffold_355_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31519..33120
DNA (1602bp) protein (534aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGY2_9CLOT
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CDC22865.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ram2; alpha-L-rhamnosidase
L2_022_060G1_scaffold_355_29
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33316..34995
DNA (1680bp) protein (560aa)
SWIM zinc finger domain protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5D6_BLAHA
SWIM zinc finger domain protein {ECO:0000313|EMBL:EEX22368.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
putative SWIM zinc finger protein
L2_022_060G1_scaffold_355_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35470..35850
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22860.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glyoxalase
Displaying items 1-30 of 31 in total

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