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L2_022_060G1_scaffold_407

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_407_1
unknown

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295..1419
DNA (1125bp) protein (375aa)

This feature has no annotations

L2_022_060G1_scaffold_407_2
unknown

Not on your lists

1486..2301
DNA (816bp) protein (272aa)

This feature has no annotations

L2_022_060G1_scaffold_407_3
unknown

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2399..4210
DNA (1812bp) protein (604aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=T4TRC1_CLODI
L2_022_060G1_scaffold_407_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4406..5737
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002DF02D0
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:ERK68074.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_022_060G1_scaffold_407_5
Clostridium sp. CAG:793, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5838..6803
DNA (966bp) protein (322aa)
Integrase n=1 Tax=Clostridium sp. CAG:793 RepID=R5NCP2_9CLOT
Integrase {ECO:0000313|EMBL:CCY99669.1}; TaxID=1262840 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:793.;"
integrase
L2_022_060G1_scaffold_407_6
unknown

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6815..7699
DNA (885bp) protein (295aa)

This feature has no annotations

L2_022_060G1_scaffold_407_7
Caligus rogercresseyi, Caligus, Siphonostomatoida, Copepoda, Arthropoda, Metazoa

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7713..8114
DNA (402bp) protein (134aa)
Ribonuclease H1 n=1 Tax=Caligus rogercresseyi RepID=C1BPL6_9MAXI
Ribonuclease H1 {ECO:0000313|EMBL:ACO10969.1}; TaxID=217165 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Maxillopoda; Copepoda; Siphonostomatoida; Caligidae; Caligus.;" source="Caligus rogercresseyi (Sea louse).;"
ribonuclease
L2_022_060G1_scaffold_407_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8210..8389
DNA (180bp) protein (60aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6BA70_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ28446.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L2_022_060G1_scaffold_407_9
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8453..9622
DNA (1170bp) protein (390aa)
Phage integrase family protein n=4 Tax=Clostridium difficile RepID=T4JUD2_CLODI
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AGY75892.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L2_022_060G1_scaffold_407_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10215..10688
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y316_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11042.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_060G1_scaffold_407_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10856..11803
DNA (948bp) protein (316aa)
Transglycosylase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5W6_9CLOT
Transglycosylase {ECO:0000313|EMBL:CDA11043.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transglycosylase
L2_022_060G1_scaffold_407_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11819..12232
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ADE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11044.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_407_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12309..13016
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ADD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95285.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
membrane protein
L2_022_060G1_scaffold_407_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13146..13460)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ADD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11046.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_407_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13511..13945)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ADD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11047.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_407_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14274..15530
DNA (1257bp) protein (419aa)
Ion channel n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5X1_9CLOT
Ion channel {ECO:0000313|EMBL:CDA11048.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_407_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15487..17325
DNA (1839bp) protein (613aa)
UPI0003D5A267 related cluster n=1 Tax=unknown RepID=UPI0003D5A267
Uncharacterized protein {ECO:0000313|EMBL:ETI94773.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
oligoendopeptidase
L2_022_060G1_scaffold_407_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17345..18274
DNA (930bp) protein (310aa)
Putative thioredoxin-disulfide reductase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X8C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI94772.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
thioredoxin-disulfide reductase
L2_022_060G1_scaffold_407_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18291..18608
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XQK2_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
trxA2; thioredoxin
L2_022_060G1_scaffold_407_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18784..19263
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y327_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11052.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_407_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19477..20172
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=B0ADD1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDQ95277.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
two-component response regulator
L2_022_060G1_scaffold_407_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20183..22318
DNA (2136bp) protein (712aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D65670 related cluster n=1 Tax=unknown RepID=UPI0003D65670
two-component sensor histidine kinase
L2_022_060G1_scaffold_407_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22524..23894)
DNA (1371bp) protein (457aa)
Amino acid carrier protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ADC9_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EDQ95275.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sodium:solute symporter
L2_022_060G1_scaffold_407_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24604..25149
DNA (546bp) protein (182aa)
Piwi domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ADC8_9FIRM
Piwi domain protein {ECO:0000313|EMBL:EDQ95274.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_060G1_scaffold_407_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25225..26814
DNA (1590bp) protein (530aa)
Piwi domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XQK4_9CLOT
Piwi domain protein {ECO:0000313|EMBL:CDA11056.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_407_26

Not on your lists

comp(26879..27241)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ADC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17680.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_060G1_scaffold_407_27

Not on your lists

27445..28254
DNA (810bp) protein (270aa)
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ADC6_9FIRM
Glutamate 5-kinase {ECO:0000313|EMBL:ETJ17679.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_060G1_scaffold_407_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28270..29514
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XF86_9CLOT
L2_022_060G1_scaffold_407_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29808..30605
DNA (798bp) protein (266aa)
Formate/nitrite transporter n=2 Tax=Clostridiales RepID=B0ADC4_9FIRM
Formate/nitrite transporter {ECO:0000313|EMBL:CDA11060.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
nirC; nitrite transporter
Displaying 29 items

View Taxonomy