ggKbase home page

L2_022_060G1_scaffold_419

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_419_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
fhs2; formyl-THF synthetase Fhs2 (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=3 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8H4_9FIRM
L2_022_060G1_scaffold_419_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(992..2077)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95461.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
conserved hypothetical protein
L2_022_060G1_scaffold_419_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2256..2990
DNA (735bp) protein (245aa)
HAD hydrolase family IB n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XY57_9CLOT
HAD hydrolase family IB {ECO:0000313|EMBL:CDA09422.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
phosphoserine phosphatase
L2_022_060G1_scaffold_419_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3014..3976
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XLK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09421.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_419_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4168..5223
DNA (1056bp) protein (352aa)
radical SAM domain-containing protein (EC:2.8.1.6)
UPI0003D67630 related cluster n=1 Tax=unknown RepID=UPI0003D67630
Uncharacterized protein {ECO:0000313|EMBL:ETI94085.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L2_022_060G1_scaffold_419_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5383..6312)
DNA (930bp) protein (310aa)
Cysteine synthase A {ECO:0000313|EMBL:EDQ97321.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EDQ97321.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K3_9FIRM
L2_022_060G1_scaffold_419_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6361..7671)
DNA (1311bp) protein (437aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K4_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EDQ97322.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L2_022_060G1_scaffold_419_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7868..8302)
DNA (435bp) protein (145aa)
Transcriptional regulator Rrf2 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XY52_9CLOT
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDA09417.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional regulator, BadM/Rrf2 family
L2_022_060G1_scaffold_419_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8701..9594
DNA (894bp) protein (298aa)
UPI0003D627E3 related cluster n=1 Tax=unknown RepID=UPI0003D627E3
Uncharacterized protein {ECO:0000313|EMBL:ETI94089.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
AraC family HTH transcriptional regulator
L2_022_060G1_scaffold_419_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9656..10141)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09415.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_419_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10159..10575)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97326.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_060G1_scaffold_419_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10565..11404)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X111_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09413.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_419_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11591..12517
DNA (927bp) protein (309aa)
Transcriptional regulator LysR family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XY47_9CLOT
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA09412.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional regulator, LysR family
L2_022_060G1_scaffold_419_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12782..13969
DNA (1188bp) protein (396aa)
mdeA2; methionine gamma-lyase MdeA (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XLJ0_9CLOT
Methionine gamma-lyase {ECO:0000313|EMBL:CDA09411.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_060G1_scaffold_419_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14058..14885)
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L2_9FIRM
L2_022_060G1_scaffold_419_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15048..15686)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5XAI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09409.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
nitroreductase
L2_022_060G1_scaffold_419_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15807..16070)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97332.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_060G1_scaffold_419_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16270..17625)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97333.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sodium:alanine symporter family protein
L2_022_060G1_scaffold_419_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18136..19440
DNA (1305bp) protein (435aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L6_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDQ97334.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Transporter, Major Facilitator Superfamily(MFS)
L2_022_060G1_scaffold_419_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19600..23292
DNA (3693bp) protein (1231aa)
RND transporter HAE1/HME family permease protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3M1_9CLOT
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDA09405.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Cation/multidrug efflux pump
L2_022_060G1_scaffold_419_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23433..25373)
DNA (1941bp) protein (647aa)
Hsp90 protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAI2_9CLOT
Hsp90 protein {ECO:0000313|EMBL:CDA09404.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
htpG; heat shock protein 90
L2_022_060G1_scaffold_419_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25788..26153)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X101_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09403.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_419_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26405..26824)
DNA (420bp) protein (140aa)
Putative Hsp20 family chaperone n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XY34_9CLOT
Putative Hsp20 family chaperone {ECO:0000313|EMBL:CDA09402.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_419_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27004..27438)
DNA (435bp) protein (145aa)
Hsp20/alpha crystallin family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XLI2_9CLOT
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDA09401.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_419_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27625..29013)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XJU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18409.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Site-specific recombinase XerC
L2_022_060G1_scaffold_419_26
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29118..29312)
DNA (195bp) protein (65aa)
Uncharacterized protein n=7 Tax=Clostridiales RepID=B6FU65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGG83777.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
Displaying 26 items

View Taxonomy