ggKbase home page

L2_022_060G1_scaffold_440

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_440_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

189..719
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70979.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_022_060G1_scaffold_440_2
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

703..1335
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MI37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70341.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
transposase for insertion sequence element
L2_022_060G1_scaffold_440_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1465..1974
DNA (510bp) protein (170aa)
Uncharacterized protein n=8 Tax=Clostridiales RepID=A7AYV2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78957.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_022_060G1_scaffold_440_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1980..2615
DNA (636bp) protein (212aa)
Uncharacterized protein n=7 Tax=Lachnospiraceae RepID=A7AYV1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78956.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transposase for insertion sequence element
L2_022_060G1_scaffold_440_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2722..3171
DNA (450bp) protein (150aa)
ISDet4, transposase n=2 Tax=Dorea longicatena DSM 13814 RepID=A6BDL2_9FIRM
ISDet4, transposase {ECO:0000313|EMBL:EDM63217.1}; Transposase, Mutator family {ECO:0000313|EMBL:EDM64529.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transposase
L2_022_060G1_scaffold_440_6
unknown

Not on your lists

3473..3679
DNA (207bp) protein (69aa)

This feature has no annotations

L2_022_060G1_scaffold_440_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3868..4515)
DNA (648bp) protein (216aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000313|EMBL:EEA80628.1}; EC=2.7.8.- {ECO:0000313|EMBL:EEA80628.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN9_9CLOT
phosphopantethiene-protein transferase
L2_022_060G1_scaffold_440_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4517..11938)
DNA (7422bp) protein (2474aa)
Putative acyl carrier protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN8_9CLOT
Putative acyl carrier protein {ECO:0000313|EMBL:EEA80627.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
amino acid adenylation domain
L2_022_060G1_scaffold_440_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11943..12680)
DNA (738bp) protein (246aa)
oleoyl-(acyl-carrier-protein) hydrolase (EC:3.1.2.14)
Thioesterase domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN7_9CLOT
Thioesterase domain protein {ECO:0000313|EMBL:EEA80626.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_440_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12699..13415)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80625.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
thioesterase domain protein
L2_022_060G1_scaffold_440_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13412..21682)
DNA (8271bp) protein (2757aa)
AMP-binding enzyme n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN4_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:EEA80623.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
amino acid adenylation domain-containing protein
L2_022_060G1_scaffold_440_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21720..21953)
DNA (234bp) protein (78aa)
Phosphopantetheine attachment domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN3_9CLOT
Phosphopantetheine attachment domain protein {ECO:0000313|EMBL:EEA80622.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
lchAB; lichenysin synthase B
L2_022_060G1_scaffold_440_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21965..24265)
DNA (2301bp) protein (767aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN2_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA80621.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_440_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24274..24972)
DNA (699bp) protein (233aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80620.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_060G1_scaffold_440_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24988..25734)
DNA (747bp) protein (249aa)
Putative saccharopine dehydrogenase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN0_9CLOT
Putative saccharopine dehydrogenase {ECO:0000313|EMBL:EEA80619.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_060G1_scaffold_440_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25689..26786)
DNA (1098bp) protein (366aa)
Putative saccharopine dehydrogenase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTN0_9CLOT
Putative saccharopine dehydrogenase {ECO:0000313|EMBL:EEA80619.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
nrsE; saccharopine dehydrogenase
L2_022_060G1_scaffold_440_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26827..27477)
DNA (651bp) protein (217aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTM9_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80618.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter ATP-binding protein
Displaying 17 items

View Taxonomy