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L2_022_060G1_scaffold_463

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_463_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..293
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1F6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI94177.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L2_022_060G1_scaffold_463_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(343..1617)
DNA (1275bp) protein (425aa)
Putative peptidoglycan binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A926_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EDQ96927.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sleC; spore peptidoglycan hydrolase
L2_022_060G1_scaffold_463_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1849..2553
DNA (705bp) protein (235aa)
sleB; Spore-cortex-lytic protein SleB (EC:3.4.-.-)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A925_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09530.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_060G1_scaffold_463_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2576..3874
DNA (1299bp) protein (433aa)
NOL1/NOP2/sun family protein n=2 Tax=Clostridiales RepID=B0A924_9FIRM
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:CDA09531.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
methylase
L2_022_060G1_scaffold_463_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4016..4576
DNA (561bp) protein (187aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D59AAA related cluster n=1 Tax=unknown RepID=UPI0003D59AAA
signal peptidase I
L2_022_060G1_scaffold_463_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4708..6366
DNA (1659bp) protein (553aa)
UPI0003D67BDA related cluster n=1 Tax=unknown RepID=UPI0003D67BDA
Uncharacterized protein {ECO:0000313|EMBL:ETI94172.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
phosphoribulokinase/uridine kinase
L2_022_060G1_scaffold_463_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6773..7336
DNA (564bp) protein (188aa)
Transcriptional regulator, ArsR family n=3 Tax=Clostridiales RepID=B0A921_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDQ96922.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_060G1_scaffold_463_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7474..8478
DNA (1005bp) protein (335aa)
aldo/keto reductase ferredoxin (EC:1.1.1.274)
4Fe-4S binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A920_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDQ96921.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L2_022_060G1_scaffold_463_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8556..8960)
DNA (405bp) protein (135aa)
Crossover junction endodeoxyribonuclease RusA n=2 Tax=Clostridiales RepID=B0A919_9FIRM
Crossover junction endodeoxyribonuclease RusA {ECO:0000313|EMBL:CDA09536.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RusA-like endodeoxyribonuclease
L2_022_060G1_scaffold_463_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9023..9934
DNA (912bp) protein (304aa)
Putative iron-sulfur cluster-binding protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0A918_9FIRM
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDQ96919.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative iron-sulfur cluster-binding protein
L2_022_060G1_scaffold_463_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10031..12241
DNA (2211bp) protein (737aa)
UPI0003D642EE related cluster n=1 Tax=unknown RepID=UPI0003D642EE
Putative ATP-dependent protease {ECO:0000313|EMBL:CDA09538.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATP-binding protein
L2_022_060G1_scaffold_463_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12432..13061
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Endonuclease III n=2 Tax=Clostridiales RepID=B0A916_9FIRM
endonuclease III
L2_022_060G1_scaffold_463_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13083..14432
DNA (1350bp) protein (450aa)
G5 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X442_9CLOT
G5 domain protein {ECO:0000313|EMBL:CDA09540.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
VanW family protein
L2_022_060G1_scaffold_463_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14565..15035
DNA (471bp) protein (157aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=3 Tax=Clostridiales RepID=B0A914_9FIRM
RNA methylase
L2_022_060G1_scaffold_463_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15064..15906
DNA (843bp) protein (281aa)
EDD domain protein, DegV family n=2 Tax=Clostridiales RepID=B0A913_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDA09542.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_060G1_scaffold_463_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16258..17289
DNA (1032bp) protein (344aa)
Basic membrane protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1H0_9CLOT
Basic membrane protein {ECO:0000313|EMBL:CDA09543.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
lipoprotein, Bmp family
L2_022_060G1_scaffold_463_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17650..18699
DNA (1050bp) protein (350aa)
Basic membrane protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAY7_9CLOT
Basic membrane protein {ECO:0000313|EMBL:CDA09544.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
lipoprotein, Bmp family
L2_022_060G1_scaffold_463_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18864..20435
DNA (1572bp) protein (524aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0A910_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA09545.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
heme ABC transporter ATP-binding protein
L2_022_060G1_scaffold_463_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20425..21516
DNA (1092bp) protein (364aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A909_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDQ96910.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ABC transporter, permease
L2_022_060G1_scaffold_463_20

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21516..22451
DNA (936bp) protein (312aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0A908_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15277.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Nucleoside transport system permease protein
L2_022_060G1_scaffold_463_21

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22712..23506
DNA (795bp) protein (265aa)
Putative sporulation protein YtxC n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A907_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15276.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_060G1_scaffold_463_22

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23900..25819
DNA (1920bp) protein (640aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAZ1_9CLOT
Threonine-tRNA ligase {ECO:0000313|EMBL:ETJ15275.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_060G1_scaffold_463_23

Not on your lists

26126..26203
DNA (78bp) protein (26aa)
Periplasmic binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X452_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ15274.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 23 items

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