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L2_022_060G1_scaffold_472

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_472_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85..351)
DNA (267bp) protein (89aa)
Putative transcriptional regulatory protein BasR n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P0S3_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG95984.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_060G1_scaffold_472_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(366..545)
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0GA54_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHL75031.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_022_060G1_scaffold_472_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

707..1063
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76536.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Predicted transcriptional regulators
L2_022_060G1_scaffold_472_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1168..2889)
DNA (1722bp) protein (574aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76537.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
transglycosylase
L2_022_060G1_scaffold_472_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2915..3322)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76538.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_472_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3412..5751)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43919.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5732..6124)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P0I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43920.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6206..6586
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77881.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_472_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6615..7451)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67667.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_472_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7538..7903)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A6BHJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43923.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7937..9733)
DNA (1797bp) protein (599aa)
TraG/TraD family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJK3_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:ERK43924.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Type IV secretory pathway, VirD4 components
L2_022_060G1_scaffold_472_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9720..9923)
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A6BHK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD20754.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_060G1_scaffold_472_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9950..10954)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43926.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10960..11841)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QYW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43927.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11816..13261)
DNA (1446bp) protein (482aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QRK4_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:ERK43928.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Relaxase/Mobilisation nuclease domain.
L2_022_060G1_scaffold_472_16
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13252..13590)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43929.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Bacterial mobilisation protein (MobC).
L2_022_060G1_scaffold_472_17
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13587..14573)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77888.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_022_060G1_scaffold_472_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14570..14671)
DNA (102bp) protein (34aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A6BHK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD20760.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_060G1_scaffold_472_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14971..15282)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CP36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32942.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L2_022_060G1_scaffold_472_20
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15298..16284)
DNA (987bp) protein (329aa)
Toprim domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QRK9_9FIRM
Toprim domain protein {ECO:0000313|EMBL:ERK43933.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_21
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16406..17626)
DNA (1221bp) protein (407aa)
Putative transcriptional regulator n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETZ20192.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
L2_022_060G1_scaffold_472_22
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17651..18367)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TZ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73151.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_022_060G1_scaffold_472_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18370..19725)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2PIF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43936.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_022_060G1_scaffold_472_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19958..20431)
DNA (474bp) protein (158aa)
DNA repair protein RadC n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TZ44_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EDM62767.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
RadC; DNA repair protein
L2_022_060G1_scaffold_472_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20421..20546)
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0Z6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45571.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_060G1_scaffold_472_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20530..20844)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UQV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73157.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_022_060G1_scaffold_472_27
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20816..23884)
DNA (3069bp) protein (1023aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P0L8_9FIRM
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:ERK43940.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Cna protein B-type domain-containing protein
L2_022_060G1_scaffold_472_28
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24151..25089)
DNA (939bp) protein (313aa)
ParB-like partition proteins n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LN14_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBL21225.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_022_060G1_scaffold_472_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25043..25870)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72702.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ATPases involved in chromosome partitioning
Displaying 29 items

View Taxonomy