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L2_022_060G1_scaffold_476

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_476_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(117..1835)
DNA (1719bp) protein (573aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVN3_9CLOT
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEG56844.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_022_060G1_scaffold_476_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2118..3566)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56845.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_022_060G1_scaffold_476_3
Prevotella sp. CAG:1058, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3733..4551)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003198DEB
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCX67413.1}; TaxID=1262918 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1058.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_022_060G1_scaffold_476_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4567..5808)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ62098.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_022_060G1_scaffold_476_5
unknown

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comp(6418..6624)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_022_060G1_scaffold_476_6
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(6706..8019)
DNA (1314bp) protein (438aa)
Mannose-1-phosphate guanylyltransferase (EC:5.3.1.8)
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N4T2_9FIRM
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:CDF07815.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L2_022_060G1_scaffold_476_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8023..8892)
DNA (870bp) protein (290aa)
Transketolase, C-terminal domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP5_9CLOT
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:EEG56856.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transketolase subunit B
L2_022_060G1_scaffold_476_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8917..9459)
DNA (543bp) protein (181aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP6_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEG56857.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NUDIX hydrolase
L2_022_060G1_scaffold_476_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9446..10228)
DNA (783bp) protein (261aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP7_9CLOT
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEG56858.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_022_060G1_scaffold_476_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10221..11240)
DNA (1020bp) protein (340aa)
HMGL-like protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP8_9CLOT
HMGL-like protein {ECO:0000313|EMBL:EEG56859.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_022_060G1_scaffold_476_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11260..12483)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56860.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_022_060G1_scaffold_476_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12509..14305)
DNA (1797bp) protein (599aa)
Thiamine pyrophosphate enzyme, central domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ1_9CLOT
Thiamine pyrophosphate enzyme, central domain protein {ECO:0000313|EMBL:EEG56862.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
thiamine pyrophosphate protein central region
L2_022_060G1_scaffold_476_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14328..15188)
DNA (861bp) protein (287aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ2_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG56863.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
aldo/keto reductase
L2_022_060G1_scaffold_476_14
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15192..16154)
DNA (963bp) protein (321aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
GDP-L-fucose synthase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ3_9CLOT
nad-dependent epimerase/dehydratase
L2_022_060G1_scaffold_476_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16120..17292)
DNA (1173bp) protein (391aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ4_9CLOT
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EEG56865.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L2_022_060G1_scaffold_476_16
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17297..18328)
DNA (1032bp) protein (344aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ5_9CLOT
L2_022_060G1_scaffold_476_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18345..19511)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56867.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_022_060G1_scaffold_476_18
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19537..20289)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G3Y6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10579.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
teichoic acids export ATP-binding protein TagH
L2_022_060G1_scaffold_476_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20304..21092)
DNA (789bp) protein (263aa)
ABC-2 type transporter n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ8_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative ABC-transporter
L2_022_060G1_scaffold_476_20
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21111..22148)
DNA (1038bp) protein (346aa)
Glycosyl transferase n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K122_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:CDB64839.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
glycosyltransferase family 2 candidate b-glycosyltransferase
L2_022_060G1_scaffold_476_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22149..23504)
DNA (1356bp) protein (452aa)
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase {ECO:0000313|EMBL:KJJ65594.1}; EC=2.7.8.40 {ECO:0000313|EMBL:KJJ65594.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Bacterial sugar transferase family protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1N2_9CLOT
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_022_060G1_scaffold_476_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23624..25231)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YD60_9CLOT
O-antigen ligase {ECO:0000313|EMBL:KJJ65593.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
Displaying 22 items

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