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L2_022_060G1_scaffold_487

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_487_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(109..396)
DNA (288bp) protein (96aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N1J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36786.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_487_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(436..648)
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=5 Tax=Erysipelotrichaceae RepID=B0N1J8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ36787.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcription regulator protein
L2_022_060G1_scaffold_487_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(650..1597)
DNA (948bp) protein (316aa)
Putative sporulation transcription regulator WhiA n=5 Tax=Erysipelotrichaceae RepID=B0N1J9_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_060G1_scaffold_487_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1606..2481)
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein CLORAM_00485 n=4 Tax=Erysipelotrichaceae RepID=B0N1K0_9FIRM
Nucleotide-binding protein CLORAM_00485 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
nucleotide-binding protein
L2_022_060G1_scaffold_487_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2676..3794
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45800.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_060G1_scaffold_487_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3810..5234
DNA (1425bp) protein (475aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RIX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36790.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
flotillin
L2_022_060G1_scaffold_487_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5313..6248)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RIX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94357.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_060G1_scaffold_487_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6321..6896)
DNA (576bp) protein (192aa)
Uracil-DNA glycosylase, family 4 n=3 Tax=Coprobacillus RepID=C3RIX0_9FIRM
Uracil-DNA glycosylase family 4 {ECO:0000313|EMBL:CCZ36792.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
uracil-DNA glycosylase superfamily protein
L2_022_060G1_scaffold_487_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6956..8080)
DNA (1125bp) protein (375aa)
Siroheme synthase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1M3_9FIRM
Siroheme synthase domain-containing protein {ECO:0000313|EMBL:EHM94355.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cysG; sirohaem synthase
L2_022_060G1_scaffold_487_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8061..9356)
DNA (1296bp) protein (432aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hemL; glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Erysipelotrichaceae RepID=B0N1M4_9FIRM
L2_022_060G1_scaffold_487_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9349..10326)
DNA (978bp) protein (326aa)
hemB; porphobilinogen synthase (EC:4.2.1.24)
Porphobilinogen synthase n=4 Tax=Erysipelotrichaceae RepID=B0N1M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45806.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_060G1_scaffold_487_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10316..10798)
DNA (483bp) protein (161aa)
Uroporphyrinogen-III C-methyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N1M6_9FIRM
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EHM94352.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_060G1_scaffold_487_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11031..11744)
DNA (714bp) protein (238aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N1M6_9FIRM
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EHM94352.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_060G1_scaffold_487_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11734..12627)
DNA (894bp) protein (298aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Porphobilinogen deaminase n=3 Tax=Erysipelotrichaceae RepID=B0N1M7_9FIRM
hemC; porphobilinogen deaminase
L2_022_060G1_scaffold_487_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12624..13814)
DNA (1191bp) protein (397aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.-)
Glutamyl-tRNA reductase n=2 Tax=Coprobacillus RepID=C3RIW3_9FIRM
L2_022_060G1_scaffold_487_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13845..14882)
DNA (1038bp) protein (346aa)
Sulfite reductase, subunit C n=3 Tax=Erysipelotrichaceae RepID=B0N1K6_9FIRM
Sulfite reductase, subunit C {ECO:0000313|EMBL:EHM94349.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
asrC; sulfite reductase, subunit C
L2_022_060G1_scaffold_487_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14895..15689)
DNA (795bp) protein (265aa)
Sulfite reductase, subunit B n=4 Tax=Erysipelotrichaceae RepID=B0N1K7_9FIRM
Sulfite reductase, subunit B {ECO:0000313|EMBL:EHM94348.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_060G1_scaffold_487_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15682..16722)
DNA (1041bp) protein (347aa)
Sulfite reductase, subunit A n=4 Tax=Erysipelotrichaceae RepID=B0N1K8_9FIRM
Sulfite reductase, subunit A {ECO:0000313|EMBL:EHM94347.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
sulfite reductase
L2_022_060G1_scaffold_487_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16841..17713
DNA (873bp) protein (291aa)
LysR substrate binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94346.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
LysR substrate binding domain family protein
L2_022_060G1_scaffold_487_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17710..18618)
DNA (909bp) protein (303aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
trxB; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=5 Tax=Erysipelotrichaceae RepID=B0N1L0_9FIRM
L2_022_060G1_scaffold_487_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18620..19282)
DNA (663bp) protein (221aa)
Pyrophosphatase PpaX {ECO:0000313|EMBL:EDS19626.1}; EC=3.6.1.1 {ECO:0000313|EMBL:EDS19626.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Pyrophosphatase PpaX n=3 Tax=Erysipelotrichaceae RepID=B0N1L1_9FIRM
pyrophosphatase PpaX
L2_022_060G1_scaffold_487_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19368..19874
DNA (507bp) protein (169aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N1L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94343.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
flavodoxin/nitric oxide synthase
L2_022_060G1_scaffold_487_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19965..20297
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9QWG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36798.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_487_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20362..20820
DNA (459bp) protein (153aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1L3_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS19628.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
AraC family transcriptional regulator
L2_022_060G1_scaffold_487_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20900..21607
DNA (708bp) protein (236aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RIV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36799.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_487_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21591..22223
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36799.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
phospholipase/carboxylesterase
L2_022_060G1_scaffold_487_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22362..22502)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19631.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_060G1_scaffold_487_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22566..23231)
DNA (666bp) protein (222aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RIV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36800.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
helix-turn-helix domain-containing protein
L2_022_060G1_scaffold_487_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23475..23615)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37431.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_022_060G1_scaffold_487_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23670..24905)
DNA (1236bp) protein (412aa)
Roundabout, axon guidance receptor 3 n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z366_EUBE2
roundabout, axon guidance receptor 3
Roundabout, axon guidance receptor 3 {ECO:0000313|EMBL:ACR72656.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Displaying 30 items

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