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L2_022_060G1_scaffold_575

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_575_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..86
DNA (84bp) protein (28aa)
Transposase-like protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4E9_9FIRM
Transposase-like protein {ECO:0000313|EMBL:EDS17526.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_060G1_scaffold_575_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(203..1501)
DNA (1299bp) protein (433aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RJ33_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS19812.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
diguanylate cyclase (GGDEF) domain-containing protein
L2_022_060G1_scaffold_575_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1476..2120)
DNA (645bp) protein (215aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AP05_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CCZ33679.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
diguanylate cyclase (GGDEF) domain
L2_022_060G1_scaffold_575_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2203..3195)
DNA (993bp) protein (331aa)
Oxidoreductase, NAD-binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N253_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CCZ33681.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative dehydrogenase
L2_022_060G1_scaffold_575_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3295..4629
DNA (1335bp) protein (445aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
tRNA modification GTPase MnmE n=5 Tax=Erysipelotrichaceae RepID=B0N254_9FIRM
trmE; tRNA modification GTPase TrmE
L2_022_060G1_scaffold_575_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4631..4858
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RJ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33683.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_060G1_scaffold_575_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4867..5739
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RJ37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33684.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
mechanosensitive ion channel MscS
L2_022_060G1_scaffold_575_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5702..6343
DNA (642bp) protein (214aa)
Hydrolase, NUDIX family n=4 Tax=Erysipelotrichaceae RepID=B0N257_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90835.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
NUDIX hydrolase
L2_022_060G1_scaffold_575_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6441..7253
DNA (813bp) protein (271aa)
Transcriptional regulator, RpiR family n=5 Tax=Erysipelotrichaceae RepID=B0N258_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ33687.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator
L2_022_060G1_scaffold_575_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7265..7576)
DNA (312bp) protein (104aa)
putative cellobiose phosphotransferase enzyme IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N259_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45314.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_060G1_scaffold_575_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7603..8997)
DNA (1395bp) protein (465aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=3 Tax=Erysipelotrichaceae RepID=B0N260_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33690.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_060G1_scaffold_575_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9221..9886
DNA (666bp) protein (222aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RFZ3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ33691.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
MATE efflux family protein
L2_022_060G1_scaffold_575_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9954..10526
DNA (573bp) protein (191aa)
MATE efflux family protein n=4 Tax=Erysipelotrichaceae RepID=B0N261_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM90831.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
multi antimicrobial extrusion protein MatE
L2_022_060G1_scaffold_575_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10513..11859)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N262_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33693.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
CBS/transporter associated domain-containing protein
L2_022_060G1_scaffold_575_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12038..12367
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R4M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33694.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
AraC family transcriptional regulator
L2_022_060G1_scaffold_575_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12397..12843
DNA (447bp) protein (149aa)
AraC-family transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RFZ6_9FIRM
AraC-family transcriptional regulator {ECO:0000313|EMBL:CCZ33696.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_060G1_scaffold_575_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12867..13016
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R3F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90828.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_060G1_scaffold_575_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13013..13480
DNA (468bp) protein (156aa)
Glyoxalase family protein n=4 Tax=Erysipelotrichaceae RepID=B0N265_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90827.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glyoxalase
L2_022_060G1_scaffold_575_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13592..14386
DNA (795bp) protein (265aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RJ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45321.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
XRE family transcriptional regulator
L2_022_060G1_scaffold_575_20
unknown

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14518..14613
DNA (96bp) protein (32aa)

This feature has no annotations

L2_022_060G1_scaffold_575_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14742..18188
DNA (3447bp) protein (1149aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R3E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90817.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
alkaline phosphatase-like protein
Displaying 21 items

View Taxonomy