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L2_022_060G1_scaffold_587

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_587_1
unknown

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3..233
DNA (231bp) protein (77aa)

This feature has no annotations

L2_022_060G1_scaffold_587_2
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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218..418
DNA (201bp) protein (67aa)
Helix-turn-helix domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JN94_CELLD
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03436.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L2_022_060G1_scaffold_587_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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411..1121
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002F3C412
Phage regulatory protein Rha {ECO:0000313|EMBL:EKQ56332.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
phage antirepressor KilAC-like protein
L2_022_060G1_scaffold_587_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1136..1429
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR24456.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
viral A-type inclusion protein
L2_022_060G1_scaffold_587_5
unknown

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1441..1659
DNA (219bp) protein (73aa)

This feature has no annotations

L2_022_060G1_scaffold_587_6
unknown

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1731..2057
DNA (327bp) protein (109aa)

This feature has no annotations

L2_022_060G1_scaffold_587_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2113..2289
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1QAE6_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KEI96579.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
hypothetical protein
L2_022_060G1_scaffold_587_8

Not on your lists

2229..2540
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EUP0_CLOTA
Uncharacterized protein {ECO:0000313|EMBL:AJA42503.1}; TaxID=1567012 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT453A.;"
hypothetical protein
L2_022_060G1_scaffold_587_9
unknown

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2540..2806
DNA (267bp) protein (89aa)

This feature has no annotations

L2_022_060G1_scaffold_587_10
unknown

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2806..2958
DNA (153bp) protein (51aa)

This feature has no annotations

L2_022_060G1_scaffold_587_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2955..3425
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum F RepID=A7GFX2_CLOBL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS42785.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L2_022_060G1_scaffold_587_12
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3425..4576
DNA (1152bp) protein (384aa)
Phage-associated protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EXH5_CLOTA
phage-associated protein
Phage-associated protein {ECO:0000313|EMBL:CDI49154.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L2_022_060G1_scaffold_587_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4580..4852
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2C3_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:AIY82215.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_022_060G1_scaffold_587_14
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4862..5221
DNA (360bp) protein (120aa)
DNA-binding protein n=1 Tax=Clostridium botulinum RepID=UPI0002EC3339
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABK62669.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
L2_022_060G1_scaffold_587_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5223..5786
DNA (564bp) protein (188aa)
Conserved phage-associated protein n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FS22_CLOBJ
Phage-like protein {ECO:0000313|EMBL:AJG98911.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
phage-associated protein
L2_022_060G1_scaffold_587_16
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5844..7817
DNA (1974bp) protein (658aa)
Phage related DNA polymerase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GT97_CLOLD
phage related DNA polymerase
Phage related DNA polymerase {ECO:0000313|EMBL:AKA68511.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_022_060G1_scaffold_587_17
unknown

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7830..8036
DNA (207bp) protein (69aa)

This feature has no annotations

L2_022_060G1_scaffold_587_18
unknown

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8042..8215
DNA (174bp) protein (58aa)

This feature has no annotations

L2_022_060G1_scaffold_587_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8290..10710
DNA (2421bp) protein (807aa)
Putative virulence-associated protein E n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELQ6_CLOPA
Phage-like protein {ECO:0000313|EMBL:AJG98916.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
putative virulence-associated protein E
L2_022_060G1_scaffold_587_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10713..10994
DNA (282bp) protein (94aa)
nuclease n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034609F6
VRR-NUC domain-containing protein
Nuclease {ECO:0000313|EMBL:KEI96570.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
L2_022_060G1_scaffold_587_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10991..12361
DNA (1371bp) protein (457aa)
SNF2 domain protein n=2 Tax=Clostridium botulinum F RepID=A7GFV7_CLOBL
SNF2 domain-containing protein
SNF2 domain protein {ECO:0000313|EMBL:ABS40171.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L2_022_060G1_scaffold_587_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12381..12647
DNA (267bp) protein (89aa)
Conserved domain protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BW18_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT14097.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_022_060G1_scaffold_587_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12640..12936
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum CFSAN001627 RepID=M1ZZW1_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIN79727.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_022_060G1_scaffold_587_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12967..13317
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TME8_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD22018.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_022_060G1_scaffold_587_25
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13330..13875
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K1H9_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95616.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_022_060G1_scaffold_587_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14261..14752
DNA (492bp) protein (164aa)
Terminase small subunit n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEH93234.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.;"
phage terminase small subunit
L2_022_060G1_scaffold_587_27
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14754..16133
DNA (1380bp) protein (460aa)
PBSX family phage terminase, large subunit n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F7S3_9FIRM
PBSX family phage terminase, large subunit {ECO:0000313|EMBL:EFE46229.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
phage terminase, large subunit
L2_022_060G1_scaffold_587_28
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16133..17656
DNA (1524bp) protein (508aa)
Phage minor capsid protein n=1 Tax=Clostridium intestinale URNW RepID=U2N818_9CLOT
Phage minor capsid protein {ECO:0000313|EMBL:ERK31657.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
phage portal , SPP1 Gp6-like family protein
L2_022_060G1_scaffold_587_29
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17640..17975
DNA (336bp) protein (112aa)
Phage minor capsid protein n=1 Tax=Clostridium intestinale URNW RepID=U2PZ42_9CLOT
Phage minor capsid protein {ECO:0000313|EMBL:ERK31785.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
phage minor capsid protein
Displaying 29 items

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