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L2_022_060G1_scaffold_730

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_730_1
unknown

Not on your lists

comp(93..281)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_022_060G1_scaffold_730_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(278..763)
DNA (486bp) protein (162aa)
Transposase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1K8_9FIRM
Transposase {ECO:0000313|EMBL:EDS75263.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transposase IS652
L2_022_060G1_scaffold_730_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(753..1562)
DNA (810bp) protein (270aa)
Transposase n=2 Tax=Clostridium spiroforme DSM 1552 RepID=B1C073_9FIRM
Transposase {ECO:0000313|EMBL:EDS75563.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transposase IS204/IS1001/IS1096/IS1165
L2_022_060G1_scaffold_730_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1672..2124)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75987.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_022_060G1_scaffold_730_5
unknown

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comp(2186..2461)
DNA (276bp) protein (92aa)

This feature has no annotations

L2_022_060G1_scaffold_730_6
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2468..3577)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQ44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81216.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
sugar isomerase (SIS)
L2_022_060G1_scaffold_730_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3590..4642)
DNA (1053bp) protein (351aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
SIS domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z897_9FIRM
SIS domain protein {ECO:0000313|EMBL:EDM50620.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L2_022_060G1_scaffold_730_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4632..5300)
DNA (669bp) protein (223aa)
rpe2; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=4 Tax=Erysipelotrichaceae RepID=C3RJP2_9FIRM
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EHQ45541.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_060G1_scaffold_730_9
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5297..5944)
DNA (648bp) protein (216aa)
HAD hydrolase, family IA n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2T588_9ENTE
HAD hydrolase, family IA {ECO:0000313|EMBL:EOH95399.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
Hydrolase, haloacid dehalogenase-like family
L2_022_060G1_scaffold_730_10
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5944..7053)
DNA (1110bp) protein (370aa)
Sugar isomerase (SIS) n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZIM4_9ACTN
Sugar isomerase (SIS) {ECO:0000313|EMBL:CDD40826.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
sugar isomerase (SIS)
L2_022_060G1_scaffold_730_11
unknown

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7081..7335
DNA (255bp) protein (85aa)

This feature has no annotations

L2_022_060G1_scaffold_730_12
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7389..7862
DNA (474bp) protein (158aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1Y4Q5_9ACTN
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ERI05866.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
L2_022_060G1_scaffold_730_13
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7889..8683
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Olsenella profusa F0195 RepID=U2TPQ6_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:ERL08098.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
PTS system sorbose-specific transporter subunit IIC
L2_022_060G1_scaffold_730_14
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8673..9494
DNA (822bp) protein (274aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1WBG1_9ACTN
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ERI05864.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_022_060G1_scaffold_730_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9582..10580
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2Y8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90248.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sugar isomerase (SIS)
L2_022_060G1_scaffold_730_16
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10580..12079
DNA (1500bp) protein (500aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Olsenella profusa F0195 RepID=U2TPS2_9ACTN
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERL08113.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
ribokinase-like domain-containing protein
L2_022_060G1_scaffold_730_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12083..12514
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002F27FA0
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQJ55145.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system fructose subfamily transporter subunit IIA
L2_022_060G1_scaffold_730_18
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12511..13353
DNA (843bp) protein (281aa)
Putative membrane protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NQV7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEF94390.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L2_022_060G1_scaffold_730_19
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13436..14107
DNA (672bp) protein (224aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Deoxyribose-phosphate aldolase n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SRH7_9FIRM
hypothetical protein
L2_022_060G1_scaffold_730_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14128..14916
DNA (789bp) protein (263aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z898_9FIRM
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EDM50621.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
GntR family transcriptional regulator
Displaying 20 items

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