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L2_022_060G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_060G1_scaffold_55_1
unknown

Not on your lists

477..764
DNA (288bp) protein (96aa)

This feature has no annotations

L2_022_060G1_scaffold_55_2
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(839..2146)
DNA (1308bp) protein (436aa)
Site-specific recombinase XerD n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LCN4_RUMC1
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL17379.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L2_022_060G1_scaffold_55_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2218..2421)
DNA (204bp) protein (68aa)
DNA binding domain, excisionase family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZL7_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDM98866.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
DNA binding domain, excisionase family
L2_022_060G1_scaffold_55_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3126..4277
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S084_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14219.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_022_060G1_scaffold_55_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4295..5242
DNA (948bp) protein (316aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=R0ACF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19274.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_022_060G1_scaffold_55_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5304..6344
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S082_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14217.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
putative phage-type endonuclease
L2_022_060G1_scaffold_55_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6344..8596
DNA (2253bp) protein (751aa)
RecD/TraA family helicase (EC:3.1.11.5)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S078_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14214.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_022_060G1_scaffold_55_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8638..9684
DNA (1047bp) protein (349aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AAA9_9CLOT
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EFD01287.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
class V aminotransferase
L2_022_060G1_scaffold_55_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9789..10916
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S077_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14213.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_022_060G1_scaffold_55_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10976..12241
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S076_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14212.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
CHC2 zinc finger.
L2_022_060G1_scaffold_55_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12375..13322
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S075_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14211.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_022_060G1_scaffold_55_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13306..13692
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S073_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14210.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_022_060G1_scaffold_55_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14041..15201)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KIV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31862.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_060G1_scaffold_55_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15418..16809
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KIV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31861.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_060G1_scaffold_55_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16815..18842
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KIV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31860.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_060G1_scaffold_55_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20648..21349
DNA (702bp) protein (234aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CTB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72507.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Sigma-70, region 4.
L2_022_060G1_scaffold_55_17
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21679..21996)
DNA (318bp) protein (106aa)
Transposase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUF3_TEPAE
transposase IS116/IS110/IS902 family protein
Transposase {ECO:0000313|EMBL:CCP27561.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L2_022_060G1_scaffold_55_18
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22252..22656)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=2 Tax=Clostridium citroniae WAL-17108 RepID=G5HTZ6_9CLOT
Transposase {ECO:0000313|EMBL:KJJ65307.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
transposase is116/is110/is902 family protein
L2_022_060G1_scaffold_55_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22647..22979)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=2 Tax=Clostridium citroniae WAL-17108 RepID=G5HTZ6_9CLOT
Transposase {ECO:0000313|EMBL:KJJ65307.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
transposase
L2_022_060G1_scaffold_55_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23479..23676
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P873_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93255.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_022_060G1_scaffold_55_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23735..25930
DNA (2196bp) protein (732aa)
Autoinducer 2 sensor kinase/phosphatase LuxQ {ECO:0000313|EMBL:KJJ71496.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ71496.1};; EC=3.1.3.- {ECO:0000313|EMBL:KJJ71496.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT90_9CLOT
histidine kinase
L2_022_060G1_scaffold_55_22
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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25947..27935
DNA (1989bp) protein (663aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V7R0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43537.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L2_022_060G1_scaffold_55_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28011..29405)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPS3_9CLOT
Transcriptional regulator NanR {ECO:0000313|EMBL:KJJ72502.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_022_060G1_scaffold_55_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29844..32432
DNA (2589bp) protein (863aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CWW4_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI71751.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_060G1_scaffold_55_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32485..32856
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57870.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_022_060G1_scaffold_55_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32940..33629
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B0K6_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI65710.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
transcriptional regulator with HTH domain and aminotransferase domain
L2_022_060G1_scaffold_55_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33726..34346
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01138.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_022_060G1_scaffold_55_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34402..38673
DNA (4272bp) protein (1424aa)
PAS domain S-box protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K6J0_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EGN41972.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_060G1_scaffold_55_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38711..41506
DNA (2796bp) protein (932aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MX43_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDC04308.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
signal transduction histidine kinase
L2_022_060G1_scaffold_55_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41579..44875
DNA (3297bp) protein (1099aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003701B6F
PAS domain S-box protein {ECO:0000313|EMBL:EGN41469.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
two-component system sensor histidine kinase
Displaying items 1-30 of 221 in total

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