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L2_022_103G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_27_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..282
DNA (282bp) protein (94aa)
DNA methylase n=4 Tax=root RepID=D4JTZ5_9FIRM
DNA methylase
DNA methylase {ECO:0000313|EMBL:CBK96564.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_022_103G1_scaffold_27_2
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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284..1090
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JED6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK88558.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L2_022_103G1_scaffold_27_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1087..1431
DNA (345bp) protein (115aa)
Bacterial mobilisation protein (MobC) n=3 Tax=Firmicutes RepID=D4JED5_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilization protein MobC {ECO:0000313|EMBL:ENZ49540.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L2_022_103G1_scaffold_27_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1587..1898
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=A8R7Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ49539.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_022_103G1_scaffold_27_5
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1994..2602
DNA (609bp) protein (203aa)
Uncharacterized protein n=5 Tax=root RepID=A8R7Y3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP12207.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L2_022_103G1_scaffold_27_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2599..3453
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BAP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49537.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Domain of unknown function (DUF1814).
L2_022_103G1_scaffold_27_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3450..3758
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3U6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25908.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_022_103G1_scaffold_27_8
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3813..5228
DNA (1416bp) protein (472aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JED0_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBK88552.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L2_022_103G1_scaffold_27_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5194..5427
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75033.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_022_103G1_scaffold_27_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5510..6460
DNA (951bp) protein (317aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BTF8_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI75098.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator, AraC family
L2_022_103G1_scaffold_27_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6590..7294
DNA (705bp) protein (235aa)
Cobalt transport protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BAD0_9CLOT
Cobalt transport protein {ECO:0000313|EMBL:ERI75099.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cobalt transport protein
L2_022_103G1_scaffold_27_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7294..8709
DNA (1416bp) protein (472aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BS98_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI75100.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L2_022_103G1_scaffold_27_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8742..9359
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D6E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75101.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
conserved hypothetical integral membrane protein TIGR02185
L2_022_103G1_scaffold_27_14
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9519..11333
DNA (1815bp) protein (605aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHM1_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK82276.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_103G1_scaffold_27_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11336..13072
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BTG5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI75103.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_103G1_scaffold_27_16
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13097..13468
DNA (372bp) protein (124aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NK30_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EFM25975.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
Mn-dependent transcriptional regulator
L2_022_103G1_scaffold_27_17
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13935..14360
DNA (426bp) protein (142aa)
Sigma-70, region 4 n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7Z7_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDP12221.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Sigma-70, region 4.
L2_022_103G1_scaffold_27_18
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14420..14794)
DNA (375bp) protein (125aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7Z8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP12222.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Predicted transcriptional regulators
L2_022_103G1_scaffold_27_19
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15451..15801
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
mRNA interferase n=5 Tax=Firmicutes RepID=D4JEC0_9FIRM
Growth inhibitor
L2_022_103G1_scaffold_27_20
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15881..16042
DNA (162bp) protein (54aa)
Uncharacterized protein n=4 Tax=root RepID=A8R801_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK88541.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L2_022_103G1_scaffold_27_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16098..17783
DNA (1686bp) protein (562aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A0S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49511.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_022_103G1_scaffold_27_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17938..18513
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0AM49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ53176.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L2_022_103G1_scaffold_27_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18581..18826
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZU01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ43246.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_022_103G1_scaffold_27_24
unknown

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comp(19313..19750)
DNA (438bp) protein (146aa)

This feature has no annotations

L2_022_103G1_scaffold_27_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20386..26232
DNA (5847bp) protein (1949aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZP15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ53178.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_022_103G1_scaffold_27_26
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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26752..26949
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MPH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72678.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_022_103G1_scaffold_27_27
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27031..28281
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MNH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72679.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_022_103G1_scaffold_27_28
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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28278..29408
DNA (1131bp) protein (377aa)
Thiamine biosynthesis protein ThiC n=1 Tax=Dorea sp. 5-2 RepID=R9MNP6_9FIRM
Thiamine biosynthesis protein ThiC {ECO:0000313|EMBL:EOS72680.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
thiamine biosynthesis protein thic
L2_022_103G1_scaffold_27_29
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29912..30166
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N0W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76688.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_022_103G1_scaffold_27_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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30159..30362
DNA (204bp) protein (68aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ19_CLOSY
CobQ/CobB/MinD/ParA nucleotide binding domain.
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EDY32039.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Displaying items 1-30 of 140 in total

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