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L2_022_103G1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_94_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..4200)
DNA (4200bp) protein (1400aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGL8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04031.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_022_103G1_scaffold_94_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4580..5851
DNA (1272bp) protein (424aa)
gsh; glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000313|EMBL:AFL04030.1}; EC=6.3.2.2 {ECO:0000313|EMBL:AFL04030.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Glutamate--cysteine ligase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGL7_BIFBI
L2_022_103G1_scaffold_94_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5927..6838
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CDM4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI82113.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_103G1_scaffold_94_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6861..11885)
DNA (5025bp) protein (1675aa)
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:KFI42535.1}; EC=1.3.7.8 {ECO:0000313|EMBL:KFI42535.1};; EC=1.3.99.- {ECO:0000313|EMBL:KFI42535.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
(R)-2-hydroxyglutaryl-CoA dehydratase activator (EC:1.3.7.8)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GDW7_9BIFI
L2_022_103G1_scaffold_94_5
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12044..13318)
DNA (1275bp) protein (425aa)
IS1602, transposase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L049_BIFBR
transposase
Transposase {ECO:0000313|EMBL:AIZ15201.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_022_103G1_scaffold_94_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13381..13629)
DNA (249bp) protein (83aa)
XRE family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B34A7A
Uncharacterized protein {ECO:0000313|EMBL:KFI98177.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_022_103G1_scaffold_94_7
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13776..14678)
DNA (903bp) protein (301aa)
Yga2E n=1 Tax=Corynebacterium glutamicum RepID=Q84GD2_CORGT
Yga2E {ECO:0000313|EMBL:KFI64187.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
hypothetical protein
L2_022_103G1_scaffold_94_8
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15008..15871
DNA (864bp) protein (288aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
DNA methyltransferase n=1 Tax=Nesterenkonia alba RepID=UPI0003B78728
DNA adenine methylase
L2_022_103G1_scaffold_94_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15931..16365)
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:AIW55173.1}; TaxID=1685 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve.;"
L2_022_103G1_scaffold_94_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16552..16812)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CC51_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82110.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_022_103G1_scaffold_94_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16900..17607)
DNA (708bp) protein (236aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=8 Tax=Bifidobacterium RepID=E3ELY8_BIFBS
nrdG; anaerobic ribonucleoside-triphosphate reductaseactivating protein
Ribonucleoside triphosphate reductase activating protein {ECO:0000313|EMBL:BAQ97654.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_103G1_scaffold_94_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17762..20146)
DNA (2385bp) protein (795aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:EKF15715.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EKF15715.1};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Anaerobic ribonucleoside-triphosphate reductase n=8 Tax=Bifidobacterium RepID=E3ELY7_BIFBS
L2_022_103G1_scaffold_94_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20443..21768
DNA (1326bp) protein (442aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Exodeoxyribonuclease 7 large subunit n=4 Tax=Bifidobacterium RepID=E4P067_BIFBP
L2_022_103G1_scaffold_94_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21880..22179
DNA (300bp) protein (100aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Exodeoxyribonuclease 7 small subunit n=8 Tax=Bifidobacterium RepID=E3ELY5_BIFBS
L2_022_103G1_scaffold_94_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22482..23411)
DNA (930bp) protein (310aa)
Conserved hypothetical membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P065_BIFBP
hypothetical protein
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFR49816.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_022_103G1_scaffold_94_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24401..24562
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P064_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15711.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_022_103G1_scaffold_94_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24713..25690)
DNA (978bp) protein (326aa)
Inosine/uridine-preferring nucleoside hydrolase n=3 Tax=Bifidobacterium bifidum RepID=E3ELY3_BIFBS
iunH1; inosine/uridine-preferring nucleoside hydrolase
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:ADO52679.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_94_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25764..27131)
DNA (1368bp) protein (456aa)
pyridine nucleotide-disulfide oxidoreductase family protein (EC:2.8.1.1)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CC42_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97647.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_103G1_scaffold_94_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27311..28120)
DNA (810bp) protein (270aa)
Dinucleotide-utilizing enzyme n=4 Tax=Bifidobacterium RepID=E3ELY1_BIFBS
thiF; ThiF protein
Dinucleotide-utilizing enzyme {ECO:0000313|EMBL:ADO52677.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_94_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28336..29085
DNA (750bp) protein (250aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=U2CDK9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97645.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_103G1_scaffold_94_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29138..30106)
DNA (969bp) protein (323aa)
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:KFI42523.1}; EC=3.6.1.11 {ECO:0000313|EMBL:KFI42523.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Ppx/GppA phosphatase family protein n=2 Tax=Bifidobacterium bifidum RepID=U2DKN8_BIFBI
exopolyphosphatase
L2_022_103G1_scaffold_94_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30185..31381)
DNA (1197bp) protein (399aa)
aspC; aspartate amino transferase (EC:2.6.1.1)
Aspartate amino transferase n=5 Tax=Bifidobacterium RepID=I3WGK3_BIFBI
Aminotransferase {ECO:0000313|EMBL:EFR49808.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_022_103G1_scaffold_94_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31508..32152)
DNA (645bp) protein (215aa)
Putative very short patch repair endonuclease n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGK2_BIFBI
vsr; putative very short patch repair endonuclease
Putative very short patch repair endonuclease {ECO:0000313|EMBL:AFL04015.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_022_103G1_scaffold_94_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32240..33661
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HBX5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23682.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_022_103G1_scaffold_94_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33999..34652)
DNA (654bp) protein (218aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Peptide deformylase n=2 Tax=Bifidobacterium RepID=K2M0I9_BIFBI
peptide deformylase
L2_022_103G1_scaffold_94_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34694..36079)
DNA (1386bp) protein (462aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Phosphoglucosamine mutase n=8 Tax=Bifidobacterium RepID=E3ELX4_BIFBS
L2_022_103G1_scaffold_94_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36456..37862)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI0003669DB6
Uncharacterized protein {ECO:0000313|EMBL:EFR49802.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_022_103G1_scaffold_94_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37885..38121)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DQT9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82091.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_022_103G1_scaffold_94_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38661..41273)
DNA (2613bp) protein (871aa)
Membrane alanine aminopeptidase n=5 Tax=Bifidobacterium bifidum RepID=E3ELX1_BIFBS
Aminopeptidase N {ECO:0000313|EMBL:EKE51005.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
pepN; Membrane alanine aminopeptidase
L2_022_103G1_scaffold_94_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41440..43281)
DNA (1842bp) protein (614aa)
Metal-dependent hydrolase n=7 Tax=Bifidobacterium bifidum RepID=E4NZX4_BIFBP
ribonuclease J
Metal-dependent hydrolase {ECO:0000313|EMBL:KFI42515.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Displaying items 1-30 of 49 in total

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